Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 19 665 NP_000242 19 665 XP_005264389 19 665 NP_056227 17 4312 NP_001107859 17 4312 NP_872412 17 4312 XP_006714269 17 4312 XP_005247335 17 4312 XP_005247333 17 4312 XP_005247330 17 4312 NP_060719 16 5631 NP_001258968 16 5631 NP_001011649 16 5631 NP_060988 16 5631 NP_877428 16 5631 XP_006717248 16 5631 XP_006717247 16 5631 XP_006717246 16 5631 XP_006717245 16 5631 XP_006717244 16 5631 XP_006717243 16 5631 XP_006717242 16 5631 NP_660356 16 7355 NP_659417 16 7355 NP_001269791 16 7355 XP_005271866 16 7355 XP_005271865 16 7355 XP_006715416 16 7355 XP_006715415 16 7355 XP_005266895 16 7355 NP_000375 15 9605 NP_001258691 15 9605 NP_001258692 15 9605 NP_694955 15 9605 NP_001159698 15 9605 NP_060273 15 9605 NP_112202 15 9605 NP_689478 15 9605 NP_001230696 15 9605 XP_005271958 15 9605>NP_001245210 Length = 868 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EKKIQSTLI 9 EKK+QSTLI Sbjct: 423 EKKMQSTLI 431>NP_000242 Length = 934 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EKKIQSTLI 9 EKK+QSTLI Sbjct: 489 EKKMQSTLI 497>XP_005264389 Length = 921 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EKKIQSTLI 9 EKK+QSTLI Sbjct: 489 EKKMQSTLI 497>NP_056227 Length = 567 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EKKIQSTLI 9 ++K+QSTL+ Sbjct: 458 QRKLQSTLL 466>NP_001107859 Length = 418 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKKIQSTL 8 EKKIQS L Sbjct: 133 EKKIQSIL 140>NP_872412 Length = 421 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKKIQSTL 8 EKKIQS L Sbjct: 136 EKKIQSIL 143>XP_006714269 Length = 387 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKKIQSTL 8 EKKIQS L Sbjct: 115 EKKIQSIL 122>XP_005247335 Length = 400 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EKKIQSTLI 9 ++K+QSTL+ Sbjct: 291 QRKLQSTLL 299>XP_005247333 Length = 431 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EKKIQSTLI 9 ++K+QSTL+ Sbjct: 322 QRKLQSTLL 330>XP_005247330 Length = 497 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EKKIQSTLI 9 ++K+QSTL+ Sbjct: 388 QRKLQSTLL 396>NP_060719 Length = 1893 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKKIQSTL 8 EKK+Q+T+ Sbjct: 1836 EKKLQNTM 1843>NP_001258968 Length = 1663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKKIQSTL 8 EKK+Q+T+ Sbjct: 1606 EKKLQNTM 1613>NP_001011649 Length = 1814 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKKIQSTL 8 EKK+Q+T+ Sbjct: 1757 EKKLQNTM 1764>NP_060988 Length = 874 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EKKIQSTL 8 +KKIQ+TL Sbjct: 479 KKKIQTTL 486>NP_877428 Length = 875 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EKKIQSTL 8 +KKIQ+TL Sbjct: 480 KKKIQTTL 487>XP_006717248 Length = 1664 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKKIQSTL 8 EKK+Q+T+ Sbjct: 1607 EKKLQNTM 1614>XP_006717247 Length = 1670 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKKIQSTL 8 EKK+Q+T+ Sbjct: 1607 EKKLQNTM 1614>XP_006717246 Length = 1820 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKKIQSTL 8 EKK+Q+T+ Sbjct: 1757 EKKLQNTM 1764>XP_006717245 Length = 1861 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKKIQSTL 8 EKK+Q+T+ Sbjct: 1804 EKKLQNTM 1811>XP_006717244 Length = 1867 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKKIQSTL 8 EKK+Q+T+ Sbjct: 1804 EKKLQNTM 1811>XP_006717243 Length = 1889 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKKIQSTL 8 EKK+Q+T+ Sbjct: 1826 EKKLQNTM 1833>XP_006717242 Length = 1898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKKIQSTL 8 EKK+Q+T+ Sbjct: 1835 EKKLQNTM 1842>NP_660356 Length = 481 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKKIQSTLI 9 +KKIQS L+ Sbjct: 433 DKKIQSYLL 441>NP_659417 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EKKIQSTLI 9 EK+I++TL+ Sbjct: 410 EKEIKTTLV 418>NP_001269791 Length = 489 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKKIQSTLI 9 +KKIQS L+ Sbjct: 441 DKKIQSYLL 449>XP_005271866 Length = 401 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKKIQSTLI 9 +KKIQS L+ Sbjct: 353 DKKIQSYLL 361>XP_005271865 Length = 481 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKKIQSTLI 9 +KKIQS L+ Sbjct: 433 DKKIQSYLL 441>XP_006715416 Length = 501 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EKKIQSTLI 9 EK+I++TL+ Sbjct: 410 EKEIKTTLV 418>XP_006715415 Length = 501 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EKKIQSTLI 9 EK+I++TL+ Sbjct: 410 EKEIKTTLV 418>XP_005266895 Length = 501 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EKKIQSTLI 9 EK+I++TL+ Sbjct: 410 EKEIKTTLV 418>NP_000375 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KKIQSTLI 9 KK+QST + Sbjct: 4540 KKLQSTTV 4547>NP_001258691 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EKKIQSTL 8 E+K QSTL Sbjct: 407 EQKYQSTL 414>NP_001258692 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EKKIQSTL 8 E+K QSTL Sbjct: 372 EQKYQSTL 379>NP_694955 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EKKIQSTLI 9 E K+Q TLI Sbjct: 709 EGKLQKTLI 717>NP_001159698 Length = 960 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EKKIQSTLI 9 E K+Q TLI Sbjct: 683 EGKLQKTLI 691>NP_060273 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EKKIQSTL 8 E+K QSTL Sbjct: 407 EQKYQSTL 414>NP_112202 Length = 129 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EKKIQSTLI 9 EKK Q TL+ Sbjct: 87 EKKAQLTLL 95>NP_689478 Length = 158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKKIQSTL 8 +KK+QS+L Sbjct: 36 DKKLQSSL 43>NP_001230696 Length = 78 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKKIQSTL 8 +KK+QS+L Sbjct: 36 DKKLQSSL 43>XP_005271958 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EKKIQSTLI 9 E K+Q TLI Sbjct: 664 EGKLQKTLI 672Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.124 0.277 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 438,186 Number of extensions: 565 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |