Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 20 390 XP_006713721 20 390 NP_004251 17 4312 NP_006258 16 5631 NP_001157935 16 5631 NP_001019628 16 5631 NP_001116835 16 5631 NP_005045 16 5631 NP_060089 16 5631 NP_872394 16 5631 NP_001071638 16 5631 NP_001137485 16 5631 XP_006718546 16 5631 XP_005263879 16 5631 XP_005263878 16 5631 XP_005263877 16 5631 XP_005263876 16 5631 XP_006712857 16 5631 XP_005263813 16 5631 XP_005263812 16 5631 XP_005263810 16 5631 XP_005263805 16 5631 XP_005263804 16 5631 XP_006712771 16 5631 XP_005264064 16 5631 XP_005264063 16 5631 XP_005264062 16 5631 XP_005264061 16 5631 XP_005264060 16 5631 XP_005264059 16 5631 XP_006712517 16 5631 XP_005264592 16 5631 XP_005264371 16 5631 XP_006712081 16 5631 XP_005264370 16 5631 XP_005264369 16 5631 NP_055992 16 5631 XP_006717377 16 7355 XP_006717376 16 7355 XP_005272289 16 7355 XP_006717375 16 7355 XP_005270453 16 7355 XP_005270452 16 7355 XP_005270451 16 7355 NP_003925 16 7355 NP_006836 16 7355 NP_001138303 15 9605 NP_000531 15 9605 NP_001036188 15 9605 NP_001231509 15 9605 NP_003487 15 9605 NP_001810 15 9605 NP_001254629 15 9605 NP_149079 15 9605 NP_001257697 15 9605 NP_659457 15 9605 NP_003176 15 9605 XP_006723382 15 9605 XP_006723381 15 9605 XP_006723380 15 9605 XP_006722482 15 9605 XP_006719430 15 9605 XP_006719429 15 9605 XP_006719428 15 9605 XP_005253933 15 9605 XP_006711057 15 9605 NP_001084 15 9605>NP_006209 Length = 1068 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EITAQEKDF 9 EIT QEKDF Sbjct: 542 EITEQEKDF 550>XP_006713721 Length = 1068 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EITAQEKDF 9 EIT QEKDF Sbjct: 542 EITEQEKDF 550>NP_004251 Length = 1208 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EITAQEKD 8 ++TA+EKD Sbjct: 1042 DLTAEEKD 1049>NP_006258 Length = 3224 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 2441 TAQEKD 2446>NP_001157935 Length = 1765 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1465 TAQEKD 1470>NP_001019628 Length = 1748 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1450 TAQEKD 1455>NP_001116835 Length = 1765 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1465 TAQEKD 1470>NP_005045 Length = 1765 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1465 TAQEKD 1470>NP_060089 Length = 517 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EITAQEKD 8 E+TA+EK+ Sbjct: 37 ELTAEEKE 44>NP_872394 Length = 1758 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1466 TAQEKD 1471>NP_001071638 Length = 1756 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1458 TAQEKD 1463>NP_001137485 Length = 1758 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1466 TAQEKD 1471>XP_006718546 Length = 513 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 508 TAQEKD 513>XP_005263879 Length = 1480 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1180 TAQEKD 1185>XP_005263878 Length = 1660 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1465 TAQEKD 1470>XP_005263877 Length = 1686 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1465 TAQEKD 1470>XP_005263876 Length = 1739 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1439 TAQEKD 1444>XP_006712857 Length = 1748 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1448 TAQEKD 1453>XP_005263813 Length = 1480 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1180 TAQEKD 1185>XP_005263812 Length = 1660 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1465 TAQEKD 1470>XP_005263810 Length = 1739 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1439 TAQEKD 1444>XP_005263805 Length = 1480 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1180 TAQEKD 1185>XP_005263804 Length = 1660 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1465 TAQEKD 1470>XP_006712771 Length = 1766 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1466 TAQEKD 1471>XP_005264064 Length = 2282 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1465 TAQEKD 1470>XP_005264063 Length = 3136 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 2319 TAQEKD 2324>XP_005264062 Length = 3232 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 2415 TAQEKD 2420>XP_005264061 Length = 3232 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 2441 TAQEKD 2446>XP_005264060 Length = 3250 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 2441 TAQEKD 2446>XP_005264059 Length = 3258 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 2441 TAQEKD 2446>XP_006712517 Length = 1757 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1466 TAQEKD 1471>XP_005264592 Length = 1653 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1458 TAQEKD 1463>XP_005264371 Length = 1653 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1458 TAQEKD 1463>XP_006712081 Length = 1679 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1458 TAQEKD 1463>XP_005264370 Length = 1756 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1458 TAQEKD 1463>XP_005264369 Length = 1756 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 1458 TAQEKD 1463>NP_055992 Length = 619 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TAQEKD 8 TAQEKD Sbjct: 614 TAQEKD 619>XP_006717377 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ITAQEKD 8 +TAQE+D Sbjct: 127 LTAQERD 133>XP_006717376 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ITAQEKD 8 +TAQE+D Sbjct: 235 LTAQERD 241>XP_005272289 Length = 548 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ITAQEKD 8 +TAQE+D Sbjct: 322 LTAQERD 328>XP_006717375 Length = 571 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ITAQEKD 8 +TAQE+D Sbjct: 321 LTAQERD 327>XP_005270453 Length = 671 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ITAQEKD 8 ITAQE D Sbjct: 68 ITAQEND 74>XP_005270452 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ITAQEKD 8 ITAQE D Sbjct: 122 ITAQEND 128>XP_005270451 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ITAQEKD 8 ITAQE D Sbjct: 113 ITAQEND 119>NP_003925 Length = 572 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ITAQEKD 8 +TAQE+D Sbjct: 322 LTAQERD 328>NP_006836 Length = 725 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ITAQEKD 8 ITAQE D Sbjct: 122 ITAQEND 128>NP_001138303 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EITAQEKDF 9 E+T + KDF Sbjct: 167 ELTERAKDF 175>NP_000531 Length = 5038 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EITAQEKD 8 E TAQEK+ Sbjct: 1897 EETAQEKE 1904>NP_001036188 Length = 5033 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EITAQEKD 8 E TAQEK+ Sbjct: 1897 EETAQEKE 1904>NP_001231509 Length = 3859 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ITAQEKDF 9 + AQEK F Sbjct: 1231 VAAQEKSF 1238>NP_003487 Length = 3830 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ITAQEKDF 9 + AQEK F Sbjct: 1231 VAAQEKSF 1238>NP_001810 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EITAQEKDF 9 E+T EK+F Sbjct: 554 ELTLNEKNF 562>NP_001254629 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EITAQEKDF 9 E+T + KDF Sbjct: 167 ELTERAKDF 175>NP_149079 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EITAQEK 7 E+TA+EK Sbjct: 134 EVTAREK 140>NP_001257697 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EITAQEK 7 E+TA+EK Sbjct: 39 EVTAREK 45>NP_659457 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EITAQEKDF 9 E AQEK+F Sbjct: 352 EEKAQEKEF 360>NP_003176 Length = 1085 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TAQEKDF 9 TAQ+K+F Sbjct: 920 TAQQKNF 926>XP_006723382 Length = 5027 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EITAQEKD 8 E TAQEK+ Sbjct: 1897 EETAQEKE 1904>XP_006723381 Length = 5031 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EITAQEKD 8 E TAQEK+ Sbjct: 1896 EETAQEKE 1903>XP_006723380 Length = 5032 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EITAQEKD 8 E TAQEK+ Sbjct: 1897 EETAQEKE 1904>XP_006722482 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EITAQEKDF 9 E AQEK+F Sbjct: 153 EEKAQEKEF 161>XP_006719430 Length = 2256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITAQEKDF 9 + AQEK+F Sbjct: 1262 LIAQEKEF 1269>XP_006719429 Length = 2395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITAQEKDF 9 + AQEK+F Sbjct: 1401 LIAQEKEF 1408>XP_006719428 Length = 2458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITAQEKDF 9 + AQEK+F Sbjct: 1464 LIAQEKEF 1471>XP_005253933 Length = 2458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITAQEKDF 9 + AQEK+F Sbjct: 1464 LIAQEKEF 1471>XP_006711057 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EITAQEK 7 E+TA+EK Sbjct: 135 EVTAREK 141>NP_001084 Length = 2458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITAQEKDF 9 + AQEK+F Sbjct: 1464 LIAQEKEF 1471Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.125 0.316 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 623,149 Number of extensions: 1026 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |