Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 NP_002227 17 3301 NP_001080 16 5631 NP_001124438 16 5631 NP_001159726 16 5631 NP_001159725 16 5631 NP_001052 16 5631 NP_001006658 16 7355 NP_065830 16 7355 NP_001164977 16 7355 NP_001164979 16 7355 NP_001164980 16 7355 NP_001164982 16 7355 NP_001164978 16 7355 NP_644808 16 7355 NP_001164981 16 7355 NP_003861 16 7355 XP_006723519 16 7355 XP_006723518 16 7355 XP_006723517 16 7355 NP_839943 16 7355 NP_000238 15 9605 NP_001170990 15 9605 NP_072047 15 9605 NP_001276103 15 9605 NP_001276105 15 9605 NP_001276104 15 9605 NP_653223 15 9605 XP_005257995 15 9605 XP_005257994 15 9605 NP_001273 15 9605 NP_001025177 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EISMTLTHV 9 EISM LTHV Sbjct: 2505 EISMNLTHV 2513>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EISMTLTHV 9 EISM LTHV Sbjct: 2300 EISMNLTHV 2308>NP_002227 Length = 494 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ISMTLTHV 9 +S+TLTH+ Sbjct: 268 VSLTLTHL 275>NP_001080 Length = 1704 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EISMTLTHV 9 E+S TL HV Sbjct: 1240 ELSKTLDHV 1248>NP_001124438 Length = 534 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EISMTLTHV 9 E+ +TL HV Sbjct: 489 EVKLTLLHV 497>NP_001159726 Length = 466 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EISMTLTHV 9 E+ +TL HV Sbjct: 421 EVKLTLLHV 429>NP_001159725 Length = 580 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EISMTLTHV 9 E+ +TL HV Sbjct: 535 EVKLTLLHV 543>NP_001052 Length = 534 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EISMTLTHV 9 E+ +TL HV Sbjct: 489 EVKLTLLHV 497>NP_001006658 Length = 1181 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISMTLTHV 9 ++MT THV Sbjct: 434 VAMTKTHV 441>NP_065830 Length = 1170 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISMTLTHV 9 ++MT THV Sbjct: 423 VAMTKTHV 430>NP_001164977 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EISMTLTHV 9 E+S +THV Sbjct: 92 ELSTAITHV 100>NP_001164979 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EISMTLTHV 9 E+S +THV Sbjct: 92 ELSTAITHV 100>NP_001164980 Length = 94 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EISMTLTHV 9 E+S +THV Sbjct: 40 ELSTAITHV 48>NP_001164982 Length = 127 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EISMTLTHV 9 E+S +THV Sbjct: 73 ELSTAITHV 81>NP_001164978 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EISMTLTHV 9 E+S +THV Sbjct: 92 ELSTAITHV 100>NP_644808 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EISMTLTHV 9 E+S +THV Sbjct: 92 ELSTAITHV 100>NP_001164981 Length = 94 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EISMTLTHV 9 E+S +THV Sbjct: 40 ELSTAITHV 48>NP_003861 Length = 1657 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EISMTLTH 8 E+S+TLT+ Sbjct: 1360 EVSLTLTN 1367>XP_006723519 Length = 223 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ISMTLTH 8 +SMT TH Sbjct: 184 LSMTFTH 190>XP_006723518 Length = 277 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ISMTLTH 8 +SMT TH Sbjct: 238 LSMTFTH 244>XP_006723517 Length = 327 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ISMTLTH 8 +SMT TH Sbjct: 288 LSMTFTH 294>NP_839943 Length = 1631 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EISMTLTH 8 E+S+TLT+ Sbjct: 1341 EVSLTLTN 1348>NP_000238 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 EISMTLTHV 9 ++ MTL H+ Sbjct: 95 DLRMTLAHI 103>NP_001170990 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 EISMTLTHV 9 ++ MTL H+ Sbjct: 95 DLRMTLAHI 103>NP_072047 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISMTLTHV 9 +SMTL H+ Sbjct: 423 LSMTLKHL 430>NP_001276103 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISMTLTHV 9 +SMTL H+ Sbjct: 356 LSMTLKHL 363>NP_001276105 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISMTLTHV 9 +SMTL H+ Sbjct: 234 LSMTLKHL 241>NP_001276104 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISMTLTHV 9 +SMTL H+ Sbjct: 298 LSMTLKHL 305>NP_653223 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 EISMTLTH 8 E +MT TH Sbjct: 282 EFNMTATH 289>XP_005257995 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EISMTLTH 8 EIS T TH Sbjct: 738 EISGTFTH 745>XP_005257994 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EISMTLTH 8 EIS T TH Sbjct: 738 EISGTFTH 745>NP_001273 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EISMTLTH 8 EIS T TH Sbjct: 724 EISGTFTH 731>NP_001025177 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EISMTLTH 8 EIS T TH Sbjct: 738 EISGTFTH 745Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.123 0.320 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 441,147 Number of extensions: 672 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |