Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 18 1482 XP_005248577 18 1482 XP_005248576 18 1482 NP_055230 17 2528 NP_004362 17 4312 NP_001091868 17 4312 NP_001075019 16 5631 XP_006724836 16 5631 XP_005262507 16 5631 XP_006724835 16 5631 XP_006724834 16 5631 XP_006724833 16 5631 XP_006724832 16 5631 XP_006724831 16 5631 XP_006724830 16 5631 XP_005262504 16 5631 NP_001373 16 7355 XP_005271479 16 7355 NP_001193846 15 9605 NP_000716 15 9605 NP_001193844 15 9605 NP_149061 15 9605 NP_001035738 15 9605 NP_001681 15 9605 NP_940885 15 9605 XP_005261294 15 9605 XP_005261293 15 9605 XP_005269199 15 9605 XP_006719654 15 9605 XP_006719653 15 9605 XP_006712516 15 9605 NP_001193845 15 9605 NP_060299 15 9605>NP_005912 Length = 1512 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 EIAEAIQL 8 EIAEAIQL Sbjct: 864 EIAEAIQL 871>XP_005248577 Length = 1349 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 EIAEAIQL 8 EIAEAIQL Sbjct: 701 EIAEAIQL 708>XP_005248576 Length = 1375 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 EIAEAIQL 8 EIAEAIQL Sbjct: 727 EIAEAIQL 734>NP_055230 Length = 1053 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 E+AEAIQ V Sbjct: 1034 EVAEAIQTV 1042>NP_004362 Length = 1224 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 EIAEA QL+ Sbjct: 1046 EIAEAQQLI 1054>NP_001091868 Length = 1233 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 EIAEA QL+ Sbjct: 1055 EIAEAQQLI 1063>NP_001075019 Length = 1593 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 EIAEA Q+V Sbjct: 302 EIAEAKQIV 310>XP_006724836 Length = 1582 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 EIAEA Q+V Sbjct: 302 EIAEAKQIV 310>XP_005262507 Length = 1594 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 EIAEA Q+V Sbjct: 302 EIAEAKQIV 310>XP_006724835 Length = 1615 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 EIAEA Q+V Sbjct: 302 EIAEAKQIV 310>XP_006724834 Length = 1615 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 EIAEA Q+V Sbjct: 302 EIAEAKQIV 310>XP_006724833 Length = 1620 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 EIAEA Q+V Sbjct: 302 EIAEAKQIV 310>XP_006724832 Length = 1640 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 EIAEA Q+V Sbjct: 302 EIAEAKQIV 310>XP_006724831 Length = 1640 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 EIAEA Q+V Sbjct: 302 EIAEAKQIV 310>XP_006724830 Length = 1642 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 EIAEA Q+V Sbjct: 302 EIAEAKQIV 310>XP_005262504 Length = 1642 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 EIAEA Q+V Sbjct: 302 EIAEAKQIV 310>NP_001373 Length = 408 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EIAEAIQLV 9 ++AE++QLV Sbjct: 335 KVAESLQLV 343>XP_005271479 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EIAEAIQLV 9 ++AE++QLV Sbjct: 335 KVAESLQLV 343>NP_001193846 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EIAEAIQLV 9 E+A+++QLV Sbjct: 246 ELAKSLQLV 254>NP_000716 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EIAEAIQLV 9 E+A+++QLV Sbjct: 259 ELAKSLQLV 267>NP_001193844 Length = 443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EIAEAIQLV 9 E+A+++QLV Sbjct: 218 ELAKSLQLV 226>NP_149061 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 ++ EA+QLV Sbjct: 406 DVNEAVQLV 414>NP_001035738 Length = 71 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 E+AE +QL+ Sbjct: 2 EVAEKLQLL 10>NP_001681 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 ++AE +QLV Sbjct: 488 DLAEIVQLV 496>NP_940885 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EIAEAIQL 8 ++AEA+QL Sbjct: 113 QLAEALQL 120>XP_005261294 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 ++ EA+QLV Sbjct: 217 DVNEAVQLV 225>XP_005261293 Length = 262 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 ++ EA+QLV Sbjct: 245 DVNEAVQLV 253>XP_005269199 Length = 308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EIAEAIQLV 9 E+A+++QLV Sbjct: 83 ELAKSLQLV 91>XP_006719654 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EIAEAIQLV 9 E+A+++QLV Sbjct: 106 ELAKSLQLV 114>XP_006719653 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EIAEAIQLV 9 E+A+++QLV Sbjct: 106 ELAKSLQLV 114>XP_006712516 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EIAEAIQL 8 ++AEA+QL Sbjct: 113 QLAEALQL 120>NP_001193845 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EIAEAIQLV 9 E+A+++QLV Sbjct: 258 ELAKSLQLV 266>NP_060299 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EIAEAIQLV 9 ++ EA+QLV Sbjct: 376 DVNEAVQLV 384Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.133 0.296 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 274,553 Number of extensions: 367 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |