Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 20 299 XP_005273257 20 299 XP_005245315 18 1935 XP_006711447 18 1935 XP_005245314 18 1935 NP_002637 18 1935 NP_003841 17 3301 NP_001231605 16 5631 XP_005248357 16 5631 XP_005248356 16 5631 XP_006712107 16 5631 XP_005264462 16 5631 XP_005264461 16 5631 XP_005264460 16 5631 XP_006712106 16 5631 XP_006712105 16 5631 XP_005264459 16 5631 XP_006712104 16 5631 XP_005264458 16 5631 XP_005264457 16 5631 NP_002176 16 5631 NP_060741 16 5631 NP_001180550 16 7355 NP_001180551 16 7355 NP_001008781 16 7355 NP_060212 16 7355 NP_055900 16 7355 XP_005258988 16 7355 XP_006722557 16 7355 XP_006722556 16 7355 XP_006721540 16 7355 XP_005256600 16 7355 XP_005256599 16 7355 XP_005256598 16 7355 XP_006718827 16 7355 NP_001093868 16 7355 NP_001138732 15 9605 NP_005428 15 9605 NP_001138735 15 9605 NP_001138733 15 9605 NP_001138734 15 9605 NP_689594 15 9605 XP_005248250 15 9605 XP_006712319 15 9605 NP_001186073 15 9605 NP_444270 15 9605>NP_064450 Length = 1722 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EHSVTSAFK 9 EHSV+SAFK Sbjct: 842 EHSVSSAFK 850>XP_005273257 Length = 1726 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EHSVTSAFK 9 EHSV+SAFK Sbjct: 846 EHSVSSAFK 854>XP_005245315 Length = 1607 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EHSVTSAFK 9 EH VT +FK Sbjct: 1117 EHGVTGSFK 1125>XP_006711447 Length = 1634 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EHSVTSAFK 9 EH VT +FK Sbjct: 1144 EHGVTGSFK 1152>XP_005245314 Length = 1634 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EHSVTSAFK 9 EH VT +FK Sbjct: 1144 EHGVTGSFK 1152>NP_002637 Length = 1634 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EHSVTSAFK 9 EH VT +FK Sbjct: 1144 EHGVTGSFK 1152>NP_003841 Length = 463 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HSVTSAFK 9 H VT AFK Sbjct: 355 HQVTEAFK 362>NP_001231605 Length = 405 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HSVTSAFK 9 H VT AFK Sbjct: 106 HGVTYAFK 113>XP_005248357 Length = 261 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EHSVTSAFK 9 +HS+T AF+ Sbjct: 52 QHSLTCAFE 60>XP_005248356 Length = 262 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EHSVTSAFK 9 +HS+T AF+ Sbjct: 52 QHSLTCAFE 60>XP_006712107 Length = 290 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HSVTSAFK 9 H VT AFK Sbjct: 106 HGVTYAFK 113>XP_005264462 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HSVTSAFK 9 H VT AFK Sbjct: 106 HGVTYAFK 113>XP_005264461 Length = 377 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HSVTSAFK 9 H VT AFK Sbjct: 106 HGVTYAFK 113>XP_005264460 Length = 384 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HSVTSAFK 9 H VT AFK Sbjct: 106 HGVTYAFK 113>XP_006712106 Length = 405 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HSVTSAFK 9 H VT AFK Sbjct: 106 HGVTYAFK 113>XP_006712105 Length = 420 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HSVTSAFK 9 H VT AFK Sbjct: 106 HGVTYAFK 113>XP_005264459 Length = 421 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HSVTSAFK 9 H VT AFK Sbjct: 106 HGVTYAFK 113>XP_006712104 Length = 423 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HSVTSAFK 9 H VT AFK Sbjct: 106 HGVTYAFK 113>XP_005264458 Length = 484 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HSVTSAFK 9 H VT AFK Sbjct: 106 HGVTYAFK 113>XP_005264457 Length = 484 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HSVTSAFK 9 H VT AFK Sbjct: 106 HGVTYAFK 113>NP_002176 Length = 459 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EHSVTSAFK 9 +HS+T AF+ Sbjct: 52 QHSLTCAFE 60>NP_060741 Length = 484 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HSVTSAFK 9 H VT AFK Sbjct: 106 HGVTYAFK 113>NP_001180550 Length = 228 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EHSVTSAF 8 +H VTS+F Sbjct: 117 DHMVTSSF 124>NP_001180551 Length = 116 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EHSVTSAF 8 +H VTS+F Sbjct: 5 DHMVTSSF 12>NP_001008781 Length = 4557 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EHSVTSAFK 9 ++ VTSA+K Sbjct: 2247 DYEVTSAYK 2255>NP_060212 Length = 1178 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 EHSVTSA 7 EH VTSA Sbjct: 554 EHCVTSA 560>NP_055900 Length = 730 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EHSVTSAFK 9 EH V + FK Sbjct: 253 EHEVNNTFK 261>XP_005258988 Length = 116 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EHSVTSAF 8 +H VTS+F Sbjct: 5 DHMVTSSF 12>XP_006722557 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 EHSVTSA 7 EH VTSA Sbjct: 452 EHCVTSA 458>XP_006722556 Length = 1100 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 EHSVTSA 7 EH VTSA Sbjct: 476 EHCVTSA 482>XP_006721540 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EHSVTSAFK 9 EH V + FK Sbjct: 234 EHEVNNTFK 242>XP_005256600 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EHSVTSAFK 9 EH V + FK Sbjct: 250 EHEVNNTFK 258>XP_005256599 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EHSVTSAFK 9 EH V + FK Sbjct: 262 EHEVNNTFK 270>XP_005256598 Length = 742 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EHSVTSAFK 9 EH V + FK Sbjct: 265 EHEVNNTFK 273>XP_006718827 Length = 3479 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EHSVTSAFK 9 ++ VTSA+K Sbjct: 1137 DYEVTSAYK 1145>NP_001093868 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 EHSVTSAFK 9 EH V + FK Sbjct: 238 EHEVNNTFK 246>NP_001138732 Length = 650 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HSVTSAF 8 HS TS+F Sbjct: 291 HSTTSSF 297>NP_005428 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HSVTSAF 8 HS TS+F Sbjct: 275 HSTTSSF 281>NP_001138735 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HSVTSAF 8 HS TS+F Sbjct: 275 HSTTSSF 281>NP_001138733 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HSVTSAF 8 HS TS+F Sbjct: 291 HSTTSSF 297>NP_001138734 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HSVTSAF 8 HS TS+F Sbjct: 275 HSTTSSF 281>NP_689594 Length = 3549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EHSVTSA 7 +HSVTS+ Sbjct: 430 DHSVTSS 436>XP_005248250 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HSVTSAFK 9 HS+ S FK Sbjct: 484 HSLASVFK 491>XP_006712319 Length = 3308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EHSVTSA 7 +HSVTS+ Sbjct: 189 DHSVTSS 195>NP_001186073 Length = 3327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EHSVTSA 7 +HSVTS+ Sbjct: 208 DHSVTSS 214>NP_444270 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 HSVTSAFK 9 HS+ S FK Sbjct: 484 HSLASVFK 491Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.111 0.290 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 423,056 Number of extensions: 594 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |