Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value XP_006723199 18 1135 XP_006723198 18 1135 XP_006723197 18 1135 XP_006723196 18 1135 NP_056418 18 1135 NP_001010848 16 5631 NP_001159444 16 5631 XP_005276355 16 5631 XP_005269501 16 5631 XP_005250801 16 5631 XP_005276060 16 5631 NP_005568 16 7355 NP_001924 16 7355 NP_055514 16 7355 NP_510882 16 7355 NP_114146 16 7355 NP_001019552 16 7355 NP_001019551 16 7355 NP_001073890 16 7355 XP_006722755 16 7355 XP_005255769 16 7355 XP_005255768 16 7355 XP_005255767 16 7355 XP_005255623 16 7355 XP_006719007 16 7355 XP_006716471 16 7355 XP_005273714 16 7355 NP_076936 16 7355 NP_056078 15 9605 NP_001155018 15 9605 NP_001078945 15 9605 NP_001275716 15 9605 NP_001167587 15 9605 NP_001167588 15 9605 NP_001076437 15 9605 NP_065904 15 9605 NP_872378 15 9605 NP_001028723 15 9605 NP_001136336 15 9605 XP_006723212 15 9605 XP_006721417 15 9605 XP_006721416 15 9605 XP_005254315 15 9605 XP_005254314 15 9605 XP_006720509 15 9605 XP_005254313 15 9605 XP_005254312 15 9605 NP_954586 15 9605>XP_006723199 Length = 505 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EGVAVASPR 9 EGVAV +PR Sbjct: 48 EGVAVTAPR 56>XP_006723198 Length = 587 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EGVAVASPR 9 EGVAV +PR Sbjct: 48 EGVAVTAPR 56>XP_006723197 Length = 587 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EGVAVASPR 9 EGVAV +PR Sbjct: 48 EGVAVTAPR 56>XP_006723196 Length = 587 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EGVAVASPR 9 EGVAV +PR Sbjct: 48 EGVAVTAPR 56>NP_056418 Length = 531 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EGVAVASPR 9 EGVAV +PR Sbjct: 48 EGVAVTAPR 56>NP_001010848 Length = 696 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EGVAVASP 8 EG A ASP Sbjct: 3 EGAAAASP 10>NP_001159444 Length = 695 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EGVAVASP 8 EG A ASP Sbjct: 3 EGAAAASP 10>XP_005276355 Length = 233 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GVAVASP 8 G+AVASP Sbjct: 38 GLAVASP 44>XP_005269501 Length = 720 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EGVAVASP 8 EG A ASP Sbjct: 3 EGAAAASP 10>XP_005250801 Length = 233 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GVAVASP 8 G+AVASP Sbjct: 38 GLAVASP 44>XP_005276060 Length = 233 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GVAVASP 8 G+AVASP Sbjct: 38 GLAVASP 44>NP_005568 Length = 2040 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EGVAVASP 8 EG AVA P Sbjct: 109 EGTAVAPP 116Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EGVAVASP 8 EG AVA P Sbjct: 223 EGTAVAPP 230Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EGVAVASP 8 EG AVA P Sbjct: 337 EGTAVAPP 344Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EGVAVASP 8 EG AVA P Sbjct: 451 EGTAVAPP 458Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EGVAVASP 8 EG AVA P Sbjct: 565 EGTAVAPP 572Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EGVAVASP 8 EG AVA P Sbjct: 679 EGTAVAPP 686Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EGVAVASP 8 EG AVA P Sbjct: 793 EGTAVAPP 800Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EGVAVASP 8 EG AVA P Sbjct: 907 EGTAVAPP 914>NP_001924 Length = 453 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VAVASPR 9 VAVA+PR Sbjct: 319 VAVATPR 325>NP_055514 Length = 1832 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EGVA A+P Sbjct: 920 EGVAEAAP 927>NP_510882 Length = 214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EGVAVASPR 9 +G+ ASPR Sbjct: 125 DGIECASPR 133>NP_114146 Length = 171 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EGVAVASPR 9 +G+ ASPR Sbjct: 82 DGIECASPR 90>NP_001019552 Length = 171 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EGVAVASPR 9 +G+ ASPR Sbjct: 82 DGIECASPR 90>NP_001019551 Length = 171 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EGVAVASPR 9 +G+ ASPR Sbjct: 82 DGIECASPR 90>NP_001073890 Length = 1703 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EGVAVASPR 9 E VAVA P+ Sbjct: 362 EDVAVAEPK 370>XP_006722755 Length = 1722 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EGVAVASPR 9 E VAVA P+ Sbjct: 362 EDVAVAEPK 370>XP_005255769 Length = 1808 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EGVA A+P Sbjct: 920 EGVAEAAP 927>XP_005255768 Length = 1832 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EGVA A+P Sbjct: 920 EGVAEAAP 927>XP_005255767 Length = 1832 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EGVA A+P Sbjct: 920 EGVAEAAP 927>XP_005255623 Length = 585 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EGVAVASPR 9 EG A SPR Sbjct: 298 EGTASVSPR 306>XP_006719007 Length = 535 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EGVAVASPR 9 EGV + +PR Sbjct: 6 EGVLIQTPR 14>XP_006716471 Length = 171 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EGVAVASPR 9 +G+ ASPR Sbjct: 82 DGIECASPR 90>XP_005273714 Length = 171 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EGVAVASPR 9 +G+ ASPR Sbjct: 82 DGIECASPR 90>NP_076936 Length = 585 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EGVAVASPR 9 EG A SPR Sbjct: 298 EGTASVSPR 306>NP_056078 Length = 3036 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EG++V SP Sbjct: 582 EGMSVGSP 589>NP_001155018 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EGVAVASPR 9 EG A A PR Sbjct: 195 EGAAPARPR 203>NP_001078945 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EG A+A+P Sbjct: 286 EGAALATP 293>NP_001275716 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 EGVAVASP 8 EG+ VA P Sbjct: 380 EGIPVAQP 387>NP_001167587 Length = 3037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EG++V SP Sbjct: 582 EGMSVGSP 589>NP_001167588 Length = 2400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EG++V SP Sbjct: 582 EGMSVGSP 589>NP_001076437 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 EGVAVASP 8 EG+ VA P Sbjct: 425 EGIPVAQP 432>NP_065904 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EG++ ASP Sbjct: 499 EGLSAASP 506>NP_872378 Length = 408 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 EGVAVASPR 9 EG ++SP+ Sbjct: 231 EGTVISSPK 239>NP_001028723 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 EGVAVASP 8 EG+ VA P Sbjct: 375 EGIPVAQP 382>NP_001136336 Length = 2521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EG+ VA+P Sbjct: 761 EGLGVATP 768>XP_006723212 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 EGVAVASPR 9 EG ++SP+ Sbjct: 271 EGTVISSPK 279>XP_006721417 Length = 2497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EG+ VA+P Sbjct: 761 EGLGVATP 768>XP_006721416 Length = 2504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EG+ VA+P Sbjct: 744 EGLGVATP 751>XP_005254315 Length = 2576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EG++V SP Sbjct: 582 EGMSVGSP 589>XP_005254314 Length = 2605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EG++V SP Sbjct: 582 EGMSVGSP 589>XP_006720509 Length = 2646 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EG++V SP Sbjct: 582 EGMSVGSP 589>XP_005254313 Length = 3057 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EG++V SP Sbjct: 582 EGMSVGSP 589>XP_005254312 Length = 3058 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EG++V SP Sbjct: 582 EGMSVGSP 589>NP_954586 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EGVAVASP 8 EG A+A+P Sbjct: 286 EGAALATP 293Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.124 0.331 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 629,757 Number of extensions: 1480 Number of successful extensions: 55 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |