Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 869 NP_671714 19 869 XP_006715890 19 869 XP_005250160 19 869 XP_005250159 19 869 NP_003213 18 1935 NP_001171536 17 3301 NP_000379 17 3301 NP_001273903 17 3301 NP_003789 17 3301 XP_005252348 17 3301 XP_005247894 17 3301 XP_006713853 17 3301 XP_005247893 17 3301 XP_006713852 17 3301 NP_001180401 16 5631 NP_001180400 16 5631 NP_001180402 16 5631 NP_001014986 16 5631 NP_004467 16 5631 NP_710163 16 5631 NP_055211 16 5631 NP_001615 16 5631 XP_006718839 16 5631 XP_005252896 16 5631 XP_005266896 16 5631 NP_542198 16 5631 NP_001257903 16 7355 NP_077816 16 7355 NP_695001 16 7355 NP_542138 16 7355 XP_006723606 16 7355 XP_006721269 16 7355 XP_006720682 16 7355 XP_005268318 16 7355 NP_001243034 15 9605 NP_003383 15 9605 NP_659455 15 9605 NP_060899 15 9605 XP_006725524 15 9605 XP_006725523 15 9605 XP_005276828 15 9605 XP_006726279 15 9605 XP_006714722 15 9605 XP_006714721 15 9605 XP_006713387 15 9605>NP_005742 Length = 3907 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EFTEIISQF 9 E TEIISQF Sbjct: 2816 EVTEIISQF 2824>NP_671714 Length = 3899 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EFTEIISQF 9 E TEIISQF Sbjct: 2808 EVTEIISQF 2816>XP_006715890 Length = 3860 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EFTEIISQF 9 E TEIISQF Sbjct: 2769 EVTEIISQF 2777>XP_005250160 Length = 3939 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EFTEIISQF 9 E TEIISQF Sbjct: 2848 EVTEIISQF 2856>XP_005250159 Length = 3952 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EFTEIISQF 9 E TEIISQF Sbjct: 2861 EVTEIISQF 2869>NP_003213 Length = 450 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EFTEIISQ 8 EFTE++SQ Sbjct: 361 EFTELLSQ 368>NP_001171536 Length = 1088 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EFTEIISQF 9 +F+E+ISQ+ Sbjct: 238 DFSELISQY 246>NP_000379 Length = 1078 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EFTEIISQF 9 +F+E+ISQ+ Sbjct: 238 DFSELISQY 246>NP_001273903 Length = 718 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EFTEIISQF 9 EF +I SQF Sbjct: 189 EFVQIFSQF 197>NP_003789 Length = 734 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EFTEIISQF 9 EF +I SQF Sbjct: 189 EFVQIFSQF 197>XP_005252348 Length = 732 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EFTEIISQF 9 EF +I SQF Sbjct: 189 EFVQIFSQF 197>XP_005247894 Length = 917 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EFTEIISQF 9 +F+E+ISQ+ Sbjct: 77 DFSELISQY 85>XP_006713853 Length = 1078 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EFTEIISQF 9 +F+E+ISQ+ Sbjct: 238 DFSELISQY 246>XP_005247893 Length = 1078 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EFTEIISQF 9 +F+E+ISQ+ Sbjct: 238 DFSELISQY 246>XP_006713852 Length = 1078 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EFTEIISQF 9 +F+E+ISQ+ Sbjct: 238 DFSELISQY 246>NP_001180401 Length = 704 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FTEIISQF 9 FTEI S+F Sbjct: 624 FTEIASKF 631>NP_001180400 Length = 735 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FTEIISQF 9 FTEI S+F Sbjct: 624 FTEIASKF 631>NP_001180402 Length = 442 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FTEIISQF 9 FTEI S+F Sbjct: 331 FTEIASKF 338>NP_001014986 Length = 719 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FTEIISQF 9 FTEI S+F Sbjct: 639 FTEIASKF 646>NP_004467 Length = 750 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FTEIISQF 9 FTEI S+F Sbjct: 639 FTEIASKF 646>NP_710163 Length = 442 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FTEIISQF 9 FTEI S+F Sbjct: 331 FTEIASKF 338>NP_055211 Length = 854 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FTEIISQF 9 + EI+SQF Sbjct: 258 YVEIVSQF 265>NP_001615 Length = 1723 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EFTEIISQ 8 +FTEII Q Sbjct: 699 KFTEIIKQ 706>XP_006718839 Length = 733 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FTEIISQF 9 FTEI S+F Sbjct: 622 FTEIASKF 629>XP_005252896 Length = 582 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FTEIISQF 9 FTEI S+F Sbjct: 471 FTEIASKF 478>XP_005266896 Length = 2131 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EFTEIISQ 8 +FTEII Q Sbjct: 1107 KFTEIIKQ 1114>NP_542198 Length = 829 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FTEIISQF 9 + EI+SQF Sbjct: 233 YVEIVSQF 240>NP_001257903 Length = 5121 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFTEII 6 EFTEII Sbjct: 3634 EFTEII 3639>NP_077816 Length = 1499 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 FTEIISQF 9 F+E++S+F Sbjct: 215 FSELVSEF 222>NP_695001 Length = 363 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FTEIISQF 9 F EII QF Sbjct: 302 FREIIDQF 309>NP_542138 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FTEIISQF 9 F EII QF Sbjct: 301 FREIIDQF 308>XP_006723606 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FTEIISQF 9 F EII QF Sbjct: 249 FREIIDQF 256>XP_006721269 Length = 5138 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFTEII 6 EFTEII Sbjct: 3651 EFTEII 3656>XP_006720682 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 FTEIISQF 9 F+E++S+F Sbjct: 215 FSELVSEF 222>XP_005268318 Length = 1499 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 FTEIISQF 9 F+E++S+F Sbjct: 215 FSELVSEF 222>NP_001243034 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TEIISQF 9 TEI+ QF Sbjct: 356 TEIVDQF 362>NP_003383 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TEIISQF 9 TEI+ QF Sbjct: 371 TEIVDQF 377>NP_659455 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EFTEIISQ 8 EFT I+SQ Sbjct: 244 EFTCIVSQ 251>NP_060899 Length = 2624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFTEIISQF 9 EFT+ +QF Sbjct: 2300 EFTDATAQF 2308>XP_006725524 Length = 2584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFTEIISQF 9 EFT+ +QF Sbjct: 2300 EFTDATAQF 2308>XP_006725523 Length = 2623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFTEIISQF 9 EFT+ +QF Sbjct: 2299 EFTDATAQF 2307>XP_005276828 Length = 2584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFTEIISQF 9 EFT+ +QF Sbjct: 2300 EFTDATAQF 2308>XP_006726279 Length = 2623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFTEIISQF 9 EFT+ +QF Sbjct: 2299 EFTDATAQF 2307>XP_006714722 Length = 2584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFTEIISQF 9 EFT+ +QF Sbjct: 2300 EFTDATAQF 2308>XP_006714721 Length = 2623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFTEIISQF 9 EFT+ +QF Sbjct: 2299 EFTDATAQF 2307>XP_006713387 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TEIISQF 9 TEI+ QF Sbjct: 356 TEIVDQF 362Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.141 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 365,760 Number of extensions: 569 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |