Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 XP_005247327 17 3301 XP_005247324 17 3301 XP_006713624 17 3301 XP_005247323 17 3301 XP_005247322 17 3301 NP_001159588 17 4312 NP_003266 17 4312 XP_005267581 17 4312 NP_057212 17 4312 NP_542377 16 5631 NP_542378 16 5631 NP_005983 16 5631 NP_036292 16 5631 NP_001265645 16 5631 NP_003254 16 5631 NP_004599 16 5631 NP_005986 16 5631 XP_006724375 16 5631 XP_005261326 16 5631 XP_005255580 16 5631 XP_005266987 16 5631 XP_006715521 16 5631 XP_005262723 16 5631 XP_005262722 16 5631 XP_006714091 16 5631 XP_005262720 16 5631 XP_005262719 16 5631 NP_001275949 16 7355 NP_789786 16 7355 NP_659464 16 7355 XP_005276824 16 7355 XP_005276823 16 7355 XP_005276822 16 7355 XP_006726278 16 7355 XP_005276821 16 7355 XP_006726277 16 7355 XP_005276820 16 7355 XP_005276819 16 7355 XP_005276818 16 7355 XP_006721643 16 7355 XP_005248961 16 7355 XP_005248520 16 7355 XP_005248519 16 7355 XP_005248518 16 7355 XP_006714633 16 7355 XP_005248517 16 7355 XP_006714632 16 7355 XP_005248516 16 7355 XP_005248515 16 7355 XP_005248514 16 7355 NP_660152 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EFSVLGTRM 9 EF VLGTRM Sbjct: 1862 EFPVLGTRM 1870>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EFSVLGTRM 9 EF VLGTRM Sbjct: 1657 EFPVLGTRM 1665>XP_005247327 Length = 274 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EFSVLGTR 8 +FS LGTR Sbjct: 257 QFSTLGTR 264>XP_005247324 Length = 429 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EFSVLGTR 8 +FS LGTR Sbjct: 412 QFSTLGTR 419>XP_006713624 Length = 432 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EFSVLGTR 8 +FS LGTR Sbjct: 415 QFSTLGTR 422>XP_005247323 Length = 435 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EFSVLGTR 8 +FS LGTR Sbjct: 418 QFSTLGTR 425>XP_005247322 Length = 435 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EFSVLGTR 8 +FS LGTR Sbjct: 418 QFSTLGTR 425>NP_001159588 Length = 359 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EFSVLGTR 8 +FS++GTR Sbjct: 228 KFSIVGTR 235>NP_003266 Length = 359 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EFSVLGTR 8 +FS++GTR Sbjct: 228 KFSIVGTR 235>XP_005267581 Length = 509 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FSVLGTRM 9 FS+LGT M Sbjct: 7 FSLLGTEM 14>NP_057212 Length = 874 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFSVLGTRM 9 EF+VL TR+ Sbjct: 447 EFTVLATRI 455>NP_542377 Length = 398 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EFSVLGTRM 9 EF+ LGT M Sbjct: 122 EFNQLGTEM 130>NP_542378 Length = 495 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EFSVLGTRM 9 EF+ LGT M Sbjct: 122 EFNQLGTEM 130>NP_005983 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EFSVLGTRM 9 EF+ LGT M Sbjct: 122 EFNQLGTEM 130>NP_036292 Length = 621 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFSVLGTRM 9 + +LGTRM Sbjct: 563 QLDILGTRM 571>NP_001265645 Length = 621 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFSVLGTRM 9 + +LGTRM Sbjct: 563 QLDILGTRM 571>NP_003254 Length = 786 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FSVLGTRM 9 F+V GTRM Sbjct: 331 FTVSGTRM 338>NP_004599 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EFSVLGTRM 9 EFS +GT M Sbjct: 103 EFSSVGTEM 111>NP_005986 Length = 385 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EFSVLGTRM 9 EF+ LGT M Sbjct: 77 EFNQLGTEM 85>XP_006724375 Length = 495 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EFSVLGTRM 9 EF+ LGT M Sbjct: 122 EFNQLGTEM 130>XP_005261326 Length = 545 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EFSVLGTRM 9 EF+ LGT M Sbjct: 172 EFNQLGTEM 180>XP_005255580 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EFSVLGTRM 9 EFS +GT M Sbjct: 103 EFSSVGTEM 111>XP_005266987 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFSVLGTRM 9 + +LGTRM Sbjct: 539 QLDILGTRM 547>XP_006715521 Length = 621 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFSVLGTRM 9 + +LGTRM Sbjct: 563 QLDILGTRM 571>XP_005262723 Length = 786 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FSVLGTRM 9 F+V GTRM Sbjct: 331 FTVSGTRM 338>XP_005262722 Length = 786 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FSVLGTRM 9 F+V GTRM Sbjct: 331 FTVSGTRM 338>XP_006714091 Length = 786 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FSVLGTRM 9 F+V GTRM Sbjct: 331 FTVSGTRM 338>XP_005262720 Length = 786 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FSVLGTRM 9 F+V GTRM Sbjct: 331 FTVSGTRM 338>XP_005262719 Length = 786 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FSVLGTRM 9 F+V GTRM Sbjct: 331 FTVSGTRM 338>NP_001275949 Length = 797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EFSVLGTR 8 +FS+LG R Sbjct: 533 DFSILGKR 540>NP_789786 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 463 EFSVLG 468>NP_659464 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EFSVLGTR 8 +FS+LG R Sbjct: 533 DFSILGKR 540>XP_005276824 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 338 EFSVLG 343>XP_005276823 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 338 EFSVLG 343>XP_005276822 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 373 EFSVLG 378>XP_006726278 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 386 EFSVLG 391>XP_005276821 Length = 438 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 390 EFSVLG 395>XP_006726277 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 458 EFSVLG 463>XP_005276820 Length = 510 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 462 EFSVLG 467>XP_005276819 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 463 EFSVLG 468>XP_005276818 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 463 EFSVLG 468>XP_006721643 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFSVLGTRM 9 E SVLG+R+ Sbjct: 328 EASVLGSRL 336>XP_005248961 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EFSVLGTR 8 +FS+LG R Sbjct: 533 DFSILGKR 540>XP_005248520 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 338 EFSVLG 343>XP_005248519 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 338 EFSVLG 343>XP_005248518 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 373 EFSVLG 378>XP_006714633 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 386 EFSVLG 391>XP_005248517 Length = 438 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 390 EFSVLG 395>XP_006714632 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 458 EFSVLG 463>XP_005248516 Length = 510 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 462 EFSVLG 467>XP_005248515 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 463 EFSVLG 468>XP_005248514 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EFSVLG 6 EFSVLG Sbjct: 463 EFSVLG 468>NP_660152 Length = 159 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FSVLGT 7 FS+LGT Sbjct: 47 FSILGT 52Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.139 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 430,426 Number of extensions: 645 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |