Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 21 229 NP_001075109 21 229 NP_653258 17 3301 NP_001170949 17 3301 NP_001170950 17 3301 NP_003578 17 3301 NP_001157711 17 3301 XP_006724682 17 3301 XP_005262138 17 3301 NP_005870 17 3301 NP_060800 17 4312 NP_001120683 17 4312 NP_001245227 17 4312 NP_001245228 17 4312 NP_001245229 17 4312 XP_005270059 17 4312 XP_006717994 17 4312 NP_000375 16 5631 NP_055196 16 5631 NP_001035197 16 5631 NP_570824 16 5631 NP_055325 16 5631 NP_149015 16 5631 NP_003072 16 5631 XP_006723677 16 5631 XP_005260867 16 5631 XP_005260865 16 5631 XP_006720180 16 5631 XP_005267590 16 5631 XP_005267589 16 5631 XP_005267588 16 5631 XP_006720179 16 5631 XP_006715989 16 5631 NP_055826 16 7355 NP_001185879 16 7355 XP_005245779 16 7355 XP_005245778 16 7355 XP_005245777 16 7355 XP_005245776 16 7355 XP_005245775 16 7355 XP_005245774 16 7355 NP_005006 16 7355 NP_005830 16 7355 NP_689699 16 7355 NP_001019554 15 9605 NP_055718 15 9605 XP_006719740 15 9605 XP_006719739 15 9605 XP_006719738 15 9605 XP_005269272 15 9605>NP_008835 Length = 4128 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EFMRNELEI 9 EF+RNELEI Sbjct: 3693 EFLRNELEI 3701>NP_001075109 Length = 4097 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EFMRNELEI 9 EF+RNELEI Sbjct: 3693 EFLRNELEI 3701>NP_653258 Length = 690 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 +F+ NELEI Sbjct: 613 KFIENELEI 621>NP_001170949 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 +F+ NELEI Sbjct: 555 KFIENELEI 563>NP_001170950 Length = 690 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 +F+ NELEI Sbjct: 613 KFIENELEI 621>NP_003578 Length = 1041 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 EFMRNELEI 9 EFMR LEI Sbjct: 995 EFMRQVLEI 1003>NP_001157711 Length = 981 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 EFMRNELEI 9 EFMR LEI Sbjct: 935 EFMRQVLEI 943>XP_006724682 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 +F+ NELEI Sbjct: 555 KFIENELEI 563>XP_005262138 Length = 690 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 +F+ NELEI Sbjct: 613 KFIENELEI 621>NP_005870 Length = 469 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EFMRNELE 8 EF++NEL+ Sbjct: 77 EFLKNELD 84>NP_060800 Length = 456 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FMRNELEI 9 FM+N LEI Sbjct: 68 FMQNHLEI 75>NP_001120683 Length = 631 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FMRNELEI 9 FM+N LEI Sbjct: 68 FMQNHLEI 75>NP_001245227 Length = 571 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FMRNELEI 9 FM+N LEI Sbjct: 8 FMQNHLEI 15>NP_001245228 Length = 558 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FMRNELEI 9 FM+N LEI Sbjct: 68 FMQNHLEI 75>NP_001245229 Length = 498 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FMRNELEI 9 FM+N LEI Sbjct: 8 FMQNHLEI 15>XP_005270059 Length = 573 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FMRNELEI 9 FM+N LEI Sbjct: 68 FMQNHLEI 75>XP_006717994 Length = 617 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FMRNELEI 9 FM+N LEI Sbjct: 68 FMQNHLEI 75>NP_000375 Length = 4563 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EFMRNELE 8 EF++NEL+ Sbjct: 4361 EFIQNELQ 4368>NP_055196 Length = 1429 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 EF+R +LE+ Sbjct: 1306 EFIREQLEL 1314>NP_001035197 Length = 1453 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 EF+R +LE+ Sbjct: 1330 EFIREQLEL 1338>NP_570824 Length = 206 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MRNELE 8 MRNELE Sbjct: 7 MRNELE 12>NP_055325 Length = 4935 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EFMRNELE 8 EF+RN+L+ Sbjct: 1576 EFIRNQLK 1583>NP_149015 Length = 5142 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EFMRNELE 8 EF+RN+L+ Sbjct: 1576 EFIRNQLK 1583>NP_003072 Length = 206 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MRNELE 8 MRNELE Sbjct: 7 MRNELE 12>XP_006723677 Length = 136 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MRNELE 8 MRNELE Sbjct: 7 MRNELE 12>XP_005260867 Length = 206 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MRNELE 8 MRNELE Sbjct: 7 MRNELE 12>XP_005260865 Length = 206 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 MRNELE 8 MRNELE Sbjct: 7 MRNELE 12>XP_006720180 Length = 269 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 EF+R +LE+ Sbjct: 146 EFIREQLEL 154>XP_005267590 Length = 1394 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 EF+R +LE+ Sbjct: 1271 EFIREQLEL 1279>XP_005267589 Length = 1418 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 EF+R +LE+ Sbjct: 1295 EFIREQLEL 1303>XP_005267588 Length = 1453 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 EF+R +LE+ Sbjct: 1330 EFIREQLEL 1338>XP_006720179 Length = 1453 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 EF+R +LE+ Sbjct: 1330 EFIREQLEL 1338>XP_006715989 Length = 5148 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EFMRNELE 8 EF+RN+L+ Sbjct: 1576 EFIRNQLK 1583>NP_055826 Length = 1858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 EFMRNELE 8 EF +NE E Sbjct: 784 EFQKNEFE 791>NP_001185879 Length = 1880 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 EFMRNELE 8 EF +NE E Sbjct: 806 EFQKNEFE 813>XP_005245779 Length = 888 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 EF+ N+LE+ Sbjct: 69 EFIFNQLEV 77>XP_005245778 Length = 902 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 EF+ N+LE+ Sbjct: 69 EFIFNQLEV 77>XP_005245777 Length = 915 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 EF+ N+LE+ Sbjct: 69 EFIFNQLEV 77>XP_005245776 Length = 916 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 EF+ N+LE+ Sbjct: 69 EFIFNQLEV 77>XP_005245775 Length = 917 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 EF+ N+LE+ Sbjct: 69 EFIFNQLEV 77>XP_005245774 Length = 918 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 EF+ N+LE+ Sbjct: 69 EFIFNQLEV 77>NP_005006 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MRNELEI 9 MRN+LE+ Sbjct: 445 MRNQLEL 451>NP_005830 Length = 904 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EFMRNELEI 9 EF+ N+LE+ Sbjct: 69 EFIFNQLEV 77>NP_689699 Length = 681 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EFMRNELEI 9 EF R LEI Sbjct: 130 EFQRGSLEI 138>NP_001019554 Length = 2385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MRNELEI 9 M+NE+EI Sbjct: 1838 MQNEIEI 1844>NP_055718 Length = 2363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MRNELEI 9 M+NE+EI Sbjct: 1816 MQNEIEI 1822>XP_006719740 Length = 1863 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MRNELEI 9 M+NE+EI Sbjct: 1316 MQNEIEI 1322>XP_006719739 Length = 2306 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MRNELEI 9 M+NE+EI Sbjct: 1759 MQNEIEI 1765>XP_006719738 Length = 2340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MRNELEI 9 M+NE+EI Sbjct: 1793 MQNEIEI 1799>XP_005269272 Length = 2356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MRNELEI 9 M+NE+EI Sbjct: 1809 MQNEIEI 1815Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.142 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 488,604 Number of extensions: 788 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |