Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 18 1135 XP_005274116 18 1935 XP_006718652 18 1935 XP_005274115 18 1935 XP_005274114 18 1935 NP_000107 17 3301 NP_851828 17 3301 XP_006724905 17 3301 XP_006724904 17 3301 XP_006724899 17 3301 NP_001899 17 4312 NP_680091 17 4312 NP_680093 17 4312 NP_680090 17 4312 NP_680092 17 4312 XP_006716308 17 4312 XP_006716307 17 4312 NP_620706 16 5631 NP_003066 16 5631 NP_001123892 16 5631 XP_005269161 16 5631 XP_005269160 16 5631 XP_005269159 16 5631 XP_005269158 16 5631 NP_000244 16 7355 NP_001805 16 7355 NP_620155 16 7355 NP_543006 16 7355 NP_061026 16 7355 NP_001157936 16 7355 XP_005260806 16 7355 XP_005263082 16 7355 XP_006712770 16 7355 XP_006712325 16 7355 NP_001034597 16 7355 NP_446464 15 9605 NP_001189398 15 9605 NP_001474 15 9605 NP_000041 15 9605 NP_004037 15 9605 NP_001001937 15 9605 NP_001244264 15 9605 NP_001001935 15 9605 NP_060124 15 9605 NP_071446 15 9605 NP_001269105 15 9605 NP_001269104 15 9605 NP_071353 15 9605 NP_060557 15 9605 NP_001285 15 9605 NP_001129316 15 9605 NP_001244263 15 9605 NP_001180236 15 9605 XP_006723598 15 9605 XP_005257627 15 9605 XP_005272257 15 9605 XP_005272256 15 9605 XP_006710825 15 9605 NP_001162023 15 9605>NP_004110 Length = 993 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EFLEFKSGV 9 EFLEFKS V Sbjct: 800 EFLEFKSCV 808>XP_005274116 Length = 1602 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFLEFKSGV 9 EFLEF +G+ Sbjct: 896 EFLEFSAGL 904>XP_006718652 Length = 2196 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFLEFKSGV 9 EFLEF +G+ Sbjct: 1466 EFLEFSAGL 1474>XP_005274115 Length = 2222 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFLEFKSGV 9 EFLEF +G+ Sbjct: 1492 EFLEFSAGL 1500>XP_005274114 Length = 2223 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFLEFKSGV 9 EFLEF +G+ Sbjct: 1493 EFLEFSAGL 1501>NP_000107 Length = 292 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EFLEFKSGV 9 EFL FK G+ Sbjct: 188 EFLRFKWGI 196>NP_851828 Length = 262 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EFLEFKSGV 9 EFL FK G+ Sbjct: 158 EFLRFKWGI 166>XP_006724905 Length = 193 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EFLEFKSGV 9 EFL FK G+ Sbjct: 89 EFLRFKWGI 97>XP_006724904 Length = 223 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EFLEFKSGV 9 EFL FK G+ Sbjct: 119 EFLRFKWGI 127>XP_006724899 Length = 310 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EFLEFKSGV 9 EFL FK G+ Sbjct: 206 EFLRFKWGI 214>NP_001899 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFLEFKSGV 9 +FL +KSGV Sbjct: 258 DFLLYKSGV 266>NP_680091 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFLEFKSGV 9 +FL +KSGV Sbjct: 258 DFLLYKSGV 266>NP_680093 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFLEFKSGV 9 +FL +KSGV Sbjct: 258 DFLLYKSGV 266>NP_680090 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFLEFKSGV 9 +FL +KSGV Sbjct: 258 DFLLYKSGV 266>NP_680092 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFLEFKSGV 9 +FL +KSGV Sbjct: 258 DFLLYKSGV 266>XP_006716308 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFLEFKSGV 9 +FL +KSGV Sbjct: 258 DFLLYKSGV 266>XP_006716307 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EFLEFKSGV 9 +FL +KSGV Sbjct: 258 DFLLYKSGV 266>NP_620706 Length = 1130 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLEFKSG 8 FL+FK+G Sbjct: 81 FLDFKAG 87>NP_003066 Length = 1214 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLEFKSG 8 FL+FK+G Sbjct: 81 FLDFKAG 87>NP_001123892 Length = 1152 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLEFKSG 8 FL+FK+G Sbjct: 81 FLDFKAG 87>XP_005269161 Length = 1151 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLEFKSG 8 FL+FK+G Sbjct: 81 FLDFKAG 87>XP_005269160 Length = 1213 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLEFKSG 8 FL+FK+G Sbjct: 81 FLDFKAG 87>XP_005269159 Length = 1244 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLEFKSG 8 FL+FK+G Sbjct: 81 FLDFKAG 87>XP_005269158 Length = 1245 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLEFKSG 8 FL+FK+G Sbjct: 81 FLDFKAG 87>NP_000244 Length = 894 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EFLEFKS 7 +FL+FKS Sbjct: 377 DFLDFKS 383>NP_001805 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 EFLEFKSGV 9 +FL +K G+ Sbjct: 379 DFLHYKKGI 387>NP_620155 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLEFKSG 8 FL+F+SG Sbjct: 406 FLDFESG 412>NP_543006 Length = 170 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EFLEFKSG 8 E +EFKSG Sbjct: 128 ENVEFKSG 135>NP_061026 Length = 387 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EFLEFKSG 8 E +EFKSG Sbjct: 128 ENVEFKSG 135>NP_001157936 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLEFKSG 8 FL+F+SG Sbjct: 406 FLDFESG 412>XP_005260806 Length = 281 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EFLEFKSG 8 E +EFKSG Sbjct: 128 ENVEFKSG 135>XP_005263082 Length = 921 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EFLEFKS 7 +FL+FKS Sbjct: 404 DFLDFKS 410>XP_006712770 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLEFKSG 8 FL+F+SG Sbjct: 406 FLDFESG 412>XP_006712325 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLEFKSG 8 FL+F+SG Sbjct: 406 FLDFESG 412>NP_001034597 Length = 276 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EFLEFKSG 8 E +EFKSG Sbjct: 128 ENVEFKSG 135>NP_446464 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LEFKSGV 9 +EFK GV Sbjct: 225 IEFKKGV 231>NP_001189398 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EFLEFK 6 EFLEF+ Sbjct: 110 EFLEFR 115>NP_001474 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EFLEFK 6 EFLEF+ Sbjct: 149 EFLEFR 154>NP_000041 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LEFKSGV 9 +EFK GV Sbjct: 225 IEFKKGV 231>NP_004037 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFLEFKSGV 9 E +EF SG+ Sbjct: 94 EMVEFSSGL 102>NP_001001937 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFLEFKSGV 9 E +EF SG+ Sbjct: 94 EMVEFSSGL 102>NP_001244264 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFLEFKSGV 9 E +EF SG+ Sbjct: 44 EMVEFSSGL 52>NP_001001935 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFLEFKSGV 9 E +EF SG+ Sbjct: 44 EMVEFSSGL 52>NP_060124 Length = 1589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EFLEFKS 7 +FLEFK+ Sbjct: 671 KFLEFKA 677>NP_071446 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EFLEFKSG 8 +FL+FK G Sbjct: 127 KFLQFKLG 134>NP_001269105 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFLEFKSGV 9 EFL FK+ + Sbjct: 269 EFLAFKNDI 277>NP_001269104 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFLEFKSGV 9 EFL FK+ + Sbjct: 357 EFLAFKNDI 365>NP_071353 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EFLEFK 6 +FLEFK Sbjct: 1058 DFLEFK 1063>NP_060557 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EFLEFK 6 +FLEFK Sbjct: 668 QFLEFK 673>NP_001285 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFLEFKSGV 9 EFL FK+ + Sbjct: 371 EFLAFKNDI 379>NP_001129316 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EFLEFKSG 8 + +EFKSG Sbjct: 129 DHVEFKSG 136>NP_001244263 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EFLEFKSGV 9 E +EF SG+ Sbjct: 94 EMVEFSSGL 102>NP_001180236 Length = 1589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EFLEFKS 7 +FLEFK+ Sbjct: 671 KFLEFKA 677>XP_006723598 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EFLEFKSG 8 + +EFKSG Sbjct: 172 DHVEFKSG 179>XP_005257627 Length = 1013 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EFLEFK 6 +FLEFK Sbjct: 890 DFLEFK 895>XP_005272257 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LEFKSGV 9 +EFK GV Sbjct: 225 IEFKKGV 231>XP_005272256 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LEFKSGV 9 +EFK GV Sbjct: 257 IEFKKGV 263>XP_006710825 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EFLEFK 6 +FLEFK Sbjct: 663 QFLEFK 668>NP_001162023 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EFLEFK 6 +FLEFK Sbjct: 628 QFLEFK 633Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.145 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 509,471 Number of extensions: 828 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |