Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 20 509 NP_001256971 17 2528 NP_001256970 17 2528 NP_115748 17 2528 NP_008919 17 4312 NP_008969 17 4312 NP_001191762 16 5631 NP_001191760 16 5631 NP_060545 16 5631 NP_001191761 16 5631 XP_005265322 16 5631 NP_476506 16 7355 NP_476505 16 7355 NP_004360 16 7355 NP_476508 16 7355 NP_476507 16 7355 XP_005246123 16 7355 XP_005246122 16 7355 XP_006712316 16 7355 NP_003493 15 9605 NP_851393 15 9605 NP_009029 15 9605 NP_658911 15 9605 NP_005788 15 9605 NP_001826 15 9605 NP_001137505 15 9605 NP_004090 15 9605 NP_001257456 15 9605 NP_001257455 15 9605 XP_006724391 15 9605 XP_005261338 15 9605 XP_005277858 15 9605 XP_006724390 15 9605 XP_006724389 15 9605 XP_005277857 15 9605 XP_005255666 15 9605 XP_005255665 15 9605 XP_005255664 15 9605 XP_005270453 15 9605 XP_005270452 15 9605 XP_005270451 15 9605 NP_660329 15 9605 NP_006836 15 9605>NP_000312 Length = 928 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EEYDSSIVF 9 EEYDS IVF Sbjct: 747 EEYDSIIVF 755>NP_001256971 Length = 191 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EEYDSSI 7 EEYDSS+ Sbjct: 73 EEYDSSL 79>NP_001256970 Length = 177 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EEYDSSI 7 EEYDSS+ Sbjct: 59 EEYDSSL 65>NP_115748 Length = 177 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EEYDSSI 7 EEYDSS+ Sbjct: 59 EEYDSSL 65>NP_008919 Length = 967 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EEYDSSIVF 9 E YD++I+F Sbjct: 348 EHYDTAILF 356>NP_008969 Length = 930 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EEYDSSIVF 9 E YD++I+F Sbjct: 357 EHYDAAILF 365>NP_001191762 Length = 549 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 EEYDSSIVF 9 E+YD ++F Sbjct: 127 EDYDKYVIF 135>NP_001191760 Length = 627 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 EEYDSSIVF 9 E+YD ++F Sbjct: 238 EDYDKYVIF 246>NP_060545 Length = 660 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 EEYDSSIVF 9 E+YD ++F Sbjct: 238 EDYDKYVIF 246>NP_001191761 Length = 594 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 EEYDSSIVF 9 E+YD ++F Sbjct: 172 EDYDKYVIF 180>XP_005265322 Length = 621 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 EEYDSSIVF 9 E+YD ++F Sbjct: 238 EDYDKYVIF 246>NP_476506 Length = 1237 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YDSSIVF 9 +DSS+VF Sbjct: 391 FDSSLVF 397>NP_476505 Length = 1036 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YDSSIVF 9 +DSS+VF Sbjct: 190 FDSSLVF 196>NP_004360 Length = 3177 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YDSSIVF 9 +DSS+VF Sbjct: 597 FDSSLVF 603>NP_476508 Length = 2971 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YDSSIVF 9 +DSS+VF Sbjct: 391 FDSSLVF 397>NP_476507 Length = 2570 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YDSSIVF 9 +DSS+VF Sbjct: 190 FDSSLVF 196>XP_005246123 Length = 2770 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YDSSIVF 9 +DSS+VF Sbjct: 190 FDSSLVF 196>XP_005246122 Length = 2977 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YDSSIVF 9 +DSS+VF Sbjct: 597 FDSSLVF 603>XP_006712316 Length = 3010 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YDSSIVF 9 +DSS+VF Sbjct: 597 FDSSLVF 603>NP_003493 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 EEYDSSIVF 9 +E+D +VF Sbjct: 829 DEFDCGVVF 837>NP_851393 Length = 826 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 EEYDSSIVF 9 +E+D +VF Sbjct: 793 DEFDCGVVF 801>NP_009029 Length = 1640 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YDSSIV 8 YDSS+V Sbjct: 900 YDSSVV 905>NP_658911 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EEYDSSIV 8 E YD+SI+ Sbjct: 102 ERYDASIL 109>NP_005788 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EEYDSSIV 8 E YD+SI+ Sbjct: 102 ERYDASIL 109>NP_001826 Length = 1583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YDSSIV 8 YDSS+V Sbjct: 900 YDSSVV 905>NP_001137505 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EEYDSSIVF 9 +EY+ ++VF Sbjct: 46 KEYERAVVF 54>NP_004090 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EEYDSSIVF 9 +EY+ +I+F Sbjct: 58 KEYERAIIF 66>NP_001257456 Length = 168 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EEYDSSIVF 9 +EY+ +I+F Sbjct: 58 KEYERAIIF 66>NP_001257455 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EEYDSSIVF 9 +EY+ +I+F Sbjct: 58 KEYERAIIF 66>XP_006724391 Length = 1567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YDSSIV 8 YDSS+V Sbjct: 921 YDSSVV 926>XP_005261338 Length = 1570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YDSSIV 8 YDSS+V Sbjct: 921 YDSSVV 926>XP_005277858 Length = 1604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YDSSIV 8 YDSS+V Sbjct: 921 YDSSVV 926>XP_006724390 Length = 1623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YDSSIV 8 YDSS+V Sbjct: 883 YDSSVV 888>XP_006724389 Length = 1653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YDSSIV 8 YDSS+V Sbjct: 921 YDSSVV 926>XP_005277857 Length = 1661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YDSSIV 8 YDSS+V Sbjct: 921 YDSSVV 926>XP_005255666 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 EEYDSSIVF 9 +E+D +VF Sbjct: 829 DEFDCGVVF 837>XP_005255665 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 EEYDSSIVF 9 +E+D +VF Sbjct: 842 DEFDCGVVF 850>XP_005255664 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 EEYDSSIVF 9 +E+D +VF Sbjct: 878 DEFDCGVVF 886>XP_005270453 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EEYDSS 6 +EYDSS Sbjct: 167 QEYDSS 172>XP_005270452 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EEYDSS 6 +EYDSS Sbjct: 180 QEYDSS 185>XP_005270451 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EEYDSS 6 +EYDSS Sbjct: 212 QEYDSS 217>NP_660329 Length = 291 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EEYDSSIVF 9 +EY+ ++VF Sbjct: 55 KEYERAVVF 63>NP_006836 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EEYDSS 6 +EYDSS Sbjct: 221 QEYDSS 226Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.132 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 503,188 Number of extensions: 712 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |