Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001159579 19 869 NP_005509 19 869 NP_005742 18 1135 NP_671714 18 1135 XP_006715890 18 1135 XP_005250160 18 1135 XP_005250159 18 1135 NP_003213 18 1482 NP_001615 18 1482 XP_005266896 18 1482 NP_937870 16 5631 NP_937872 16 5631 NP_116098 16 5631 XP_006718108 16 5631 XP_006713970 16 5631 XP_006713968 16 5631 NP_002917 16 5631 NP_000161 16 7355 NP_001171536 16 7355 NP_000379 16 7355 NP_620482 16 7355 NP_001077084 16 7355 NP_001257903 16 7355 NP_056492 16 7355 NP_001153069 16 7355 NP_060639 16 7355 XP_006721269 16 7355 XP_006719162 16 7355 XP_005253462 16 7355 XP_005247894 16 7355 XP_006713853 16 7355 XP_005247893 16 7355 XP_006713852 16 7355 XP_006712362 16 7355 NP_000433 15 9605 NP_659455 15 9605 XP_005276940 15 9605 XP_005276939 15 9605 XP_005276938 15 9605 XP_005276937 15 9605 XP_006722008 15 9605 XP_006722007 15 9605 NP_057359 15 9605>NP_001159579 Length = 466 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 EEFTEIISQ 9 EEFTEI++Q Sbjct: 416 EEFTEIMNQ 424>NP_005509 Length = 508 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 EEFTEIISQ 9 EEFTEI++Q Sbjct: 458 EEFTEIMNQ 466>NP_005742 Length = 3907 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EEFTEIISQ 9 EE TEIISQ Sbjct: 2815 EEVTEIISQ 2823>NP_671714 Length = 3899 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EEFTEIISQ 9 EE TEIISQ Sbjct: 2807 EEVTEIISQ 2815>XP_006715890 Length = 3860 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EEFTEIISQ 9 EE TEIISQ Sbjct: 2768 EEVTEIISQ 2776>XP_005250160 Length = 3939 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EEFTEIISQ 9 EE TEIISQ Sbjct: 2847 EEVTEIISQ 2855>XP_005250159 Length = 3952 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EEFTEIISQ 9 EE TEIISQ Sbjct: 2860 EEVTEIISQ 2868>NP_003213 Length = 450 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EEFTEIISQ 9 +EFTE++SQ Sbjct: 360 KEFTELLSQ 368>NP_001615 Length = 1723 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EEFTEIISQ 9 E+FTEII Q Sbjct: 698 EKFTEIIKQ 706>XP_005266896 Length = 2131 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EEFTEIISQ 9 E+FTEII Q Sbjct: 1106 EKFTEIIKQ 1114>NP_937870 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EEFTEIISQ 9 EEF E+IS+ Sbjct: 540 EEFFELISK 548>NP_937872 Length = 1447 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EEFTEIISQ 9 EEF E+IS+ Sbjct: 1188 EEFFELISK 1196>NP_116098 Length = 581 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 EEFTEIISQ 9 EEF E ISQ Sbjct: 359 EEFLERISQ 367>XP_006718108 Length = 560 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 EEFTEIISQ 9 EEF E ISQ Sbjct: 359 EEFLERISQ 367>XP_006713970 Length = 646 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EEFTEIISQ 9 EEF E+IS+ Sbjct: 387 EEFFELISK 395>XP_006713968 Length = 1447 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EEFTEIISQ 9 EEF E+IS+ Sbjct: 1188 EEFFELISK 1196>NP_002917 Length = 1376 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EEFTEIISQ 9 EEF E+IS+ Sbjct: 1188 EEFFELISK 1196>NP_000161 Length = 1020 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EEFTEIISQ 9 E+FTE++ + Sbjct: 274 EDFTELVER 282>NP_001171536 Length = 1088 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EFTEIISQ 9 +F+E+ISQ Sbjct: 238 DFSELISQ 245>NP_000379 Length = 1078 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EFTEIISQ 9 +F+E+ISQ Sbjct: 238 DFSELISQ 245>NP_620482 Length = 1341 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EEFTEIISQ 9 EEF ISQ Sbjct: 264 EEFNHFISQ 272>NP_001077084 Length = 1314 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EEFTEIISQ 9 EEF ISQ Sbjct: 264 EEFNHFISQ 272>NP_001257903 Length = 5121 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 EFTEII 7 EFTEII Sbjct: 3634 EFTEII 3639>NP_056492 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EFTEIISQ 9 EFTEI S+ Sbjct: 22 EFTEITSR 29>NP_001153069 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EFTEIISQ 9 EFTEI S+ Sbjct: 22 EFTEITSR 29>NP_060639 Length = 1747 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EEFTEIISQ 9 E TE++SQ Sbjct: 1138 EPITEVVSQ 1146>XP_006721269 Length = 5138 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 EFTEII 7 EFTEII Sbjct: 3651 EFTEII 3656>XP_006719162 Length = 1676 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EEFTEIISQ 9 E TE++SQ Sbjct: 1138 EPITEVVSQ 1146>XP_005253462 Length = 1747 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EEFTEIISQ 9 E TE++SQ Sbjct: 1138 EPITEVVSQ 1146>XP_005247894 Length = 917 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EFTEIISQ 9 +F+E+ISQ Sbjct: 77 DFSELISQ 84>XP_006713853 Length = 1078 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EFTEIISQ 9 +F+E+ISQ Sbjct: 238 DFSELISQ 245>XP_005247893 Length = 1078 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EFTEIISQ 9 +F+E+ISQ Sbjct: 238 DFSELISQ 245>XP_006713852 Length = 1078 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EFTEIISQ 9 +F+E+ISQ Sbjct: 238 DFSELISQ 245>XP_006712362 Length = 1350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EEFTEIISQ 9 EEF ISQ Sbjct: 273 EEFNHFISQ 281>NP_000433 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EEFTEIISQ 9 +EF EII Q Sbjct: 265 QEFPEIIIQ 273>NP_659455 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EFTEIISQ 9 EFT I+SQ Sbjct: 244 EFTCIVSQ 251>XP_005276940 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EEFTEIISQ 9 +EF EII Q Sbjct: 265 QEFPEIIIQ 273>XP_005276939 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EEFTEIISQ 9 +EF EII Q Sbjct: 265 QEFPEIIIQ 273>XP_005276938 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EEFTEIISQ 9 +EF EII Q Sbjct: 265 QEFPEIIIQ 273>XP_005276937 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EEFTEIISQ 9 +EF EII Q Sbjct: 265 QEFPEIIIQ 273>XP_006722008 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EEFTEIISQ 9 +EF EII Q Sbjct: 265 QEFPEIIIQ 273>XP_006722007 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EEFTEIISQ 9 +EF EII Q Sbjct: 265 QEFPEIIIQ 273>NP_057359 Length = 195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EEFTEIISQ 9 EE+ +ISQ Sbjct: 56 EEYMRVISQ 64Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.127 0.298 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 407,943 Number of extensions: 697 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |