Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 18 1135 XP_005248577 18 1135 XP_005248576 18 1135 NP_733936 17 4312 NP_001071 17 4312 NP_036424 16 5631 NP_001269263 16 5631 NP_001269264 16 5631 NP_001245257 16 5631 XP_006722776 16 5631 NP_004932 15 9605 NP_001171455 15 9605 NP_055006 15 9605 NP_001180464 15 9605 NP_036293 15 9605 NP_001180463 15 9605 XP_005257171 15 9605 XP_005257170 15 9605 XP_006719619 15 9605 XP_005250696 15 9605 XP_006714023 15 9605 XP_006714022 15 9605 NP_115540 15 9605>NP_005912 Length = 1512 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EEAVAIAMA 9 EEA+AIAMA Sbjct: 1186 EEALAIAMA 1194>XP_005248577 Length = 1349 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EEAVAIAMA 9 EEA+AIAMA Sbjct: 1023 EEALAIAMA 1031>XP_005248576 Length = 1375 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EEAVAIAMA 9 EEA+AIAMA Sbjct: 1049 EEALAIAMA 1057>NP_733936 Length = 548 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EEAVAIAMA 9 EEA+AIA A Sbjct: 466 EEAIAIANA 474>NP_001071 Length = 535 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EEAVAIAMA 9 EEA+AIA A Sbjct: 453 EEAIAIANA 461>NP_036424 Length = 1136 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EAVAIAMA 9 EAVA+A+A Sbjct: 881 EAVAVALA 888>NP_001269263 Length = 771 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EAVAIAMA 9 EAVA+A+A Sbjct: 516 EAVAVALA 523>NP_001269264 Length = 1019 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EAVAIAMA 9 EAVA+A+A Sbjct: 764 EAVAVALA 771>NP_001245257 Length = 1152 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EAVAIAMA 9 EAVA+A+A Sbjct: 897 EAVAVALA 904>XP_006722776 Length = 1164 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EAVAIAMA 9 EAVA+A+A Sbjct: 909 EAVAVALA 916>NP_004932 Length = 1220 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVAIAMA 9 AVA+AMA Sbjct: 2 AVAVAMA 8>NP_001171455 Length = 1939 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 EEAVAIAMA 9 EEA A AMA Sbjct: 444 EEAQAAAMA 452>NP_055006 Length = 1980 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 EEAVAIAMA 9 EEA A AMA Sbjct: 444 EEAQAAAMA 452>NP_001180464 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EEAVAIAMA 9 EE++AI++A Sbjct: 285 EESIAISIA 293>NP_036293 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EEAVAIAMA 9 EE++AI++A Sbjct: 302 EESIAISIA 310>NP_001180463 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EEAVAIAMA 9 EE++AI++A Sbjct: 301 EESIAISIA 309>XP_005257171 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVAIAMA 9 AVA+AMA Sbjct: 2 AVAVAMA 8>XP_005257170 Length = 1218 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVAIAMA 9 AVA+AMA Sbjct: 2 AVAVAMA 8>XP_006719619 Length = 1980 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 EEAVAIAMA 9 EEA A AMA Sbjct: 444 EEAQAAAMA 452>XP_005250696 Length = 201 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EEAVAIAMA 9 EEAVA+ A Sbjct: 133 EEAVAVVRA 141>XP_006714023 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EEAVAIAMA 9 EE++AI++A Sbjct: 247 EESIAISIA 255>XP_006714022 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EEAVAIAMA 9 EE++AI++A Sbjct: 283 EESIAISIA 291>NP_115540 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EEAVAIAMA 9 EEAVA+ A Sbjct: 133 EEAVAVVRA 141Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.113 0.247 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 222,385 Number of extensions: 285 Number of successful extensions: 23 Number of sequences better than 10000.0: 23 Number of HSP's gapped: 23 Number of HSP's successfully gapped: 23 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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