Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 19 665 XP_005248577 19 665 XP_005248576 19 665 NP_001171718 17 3301 NP_062565 17 3301 NP_001171715 17 3301 NP_001171720 17 3301 NP_001171714 17 3301 NP_001171717 17 3301 NP_001171722 17 3301 NP_001171721 17 3301 NP_001171723 17 3301 NP_001171716 17 3301 NP_001171719 17 3301 XP_006717541 17 3301 XP_005252592 17 3301 XP_005252591 17 3301 XP_006717540 17 3301 XP_006717539 17 3301 XP_006717538 17 3301 XP_006717537 17 3301 XP_005252589 17 3301 XP_006717536 17 3301 XP_006717535 17 3301 XP_006717534 17 3301 XP_005252588 17 3301 XP_005252587 17 3301 XP_005252585 17 3301 NP_065777 17 4312 XP_006714724 17 4312 XP_005248616 17 4312 NP_001157915 16 5631 NP_001017922 16 5631 NP_061008 16 5631 XP_006710376 16 5631 XP_005270472 16 5631 NP_002687 16 5631 NP_055023 16 7355 NP_073751 16 7355 NP_001106853 16 7355 NP_005952 16 7355 XP_006725823 16 7355 XP_006725595 16 7355 XP_005258190 16 7355 XP_005258189 16 7355 XP_006722402 16 7355 NP_003592 15 9605 NP_001274734 15 9605 NP_001269804 15 9605 NP_001269803 15 9605 NP_001020787 15 9605 NP_003060 15 9605 XP_006724845 15 9605 XP_005262519 15 9605 XP_005262518 15 9605 XP_005263320 15 9605 NP_112595 15 9605 NP_001036134 15 9605>NP_005912 Length = 1512 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 ED IIIQQD Sbjct: 1214 EDIIIIQQD 1222>XP_005248577 Length = 1349 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 ED IIIQQD Sbjct: 1051 EDIIIIQQD 1059>XP_005248576 Length = 1375 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 ED IIIQQD Sbjct: 1077 EDIIIIQQD 1085>NP_001171718 Length = 1273 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 740 DDTVIIEDD 748>NP_062565 Length = 1356 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 756 DDTVIIEDD 764>NP_001171715 Length = 1340 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 740 DDTVIIEDD 748>NP_001171720 Length = 1244 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 696 DDTVIIEDD 704>NP_001171714 Length = 1353 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 753 DDTVIIEDD 761>NP_001171717 Length = 1310 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 740 DDTVIIEDD 748>NP_001171722 Length = 1000 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 753 DDTVIIEDD 761>NP_001171721 Length = 1031 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 753 DDTVIIEDD 761>NP_001171723 Length = 988 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 740 DDTVIIEDD 748>NP_001171716 Length = 1319 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 756 DDTVIIEDD 764>NP_001171719 Length = 1266 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 696 DDTVIIEDD 704>XP_006717541 Length = 1295 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 696 DDTVIIEDD 704>XP_005252592 Length = 1017 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 740 DDTVIIEDD 748>XP_005252591 Length = 1030 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 753 DDTVIIEDD 761>XP_006717540 Length = 1141 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 753 DDTVIIEDD 761>XP_006717539 Length = 1170 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 753 DDTVIIEDD 761>XP_006717538 Length = 1235 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 753 DDTVIIEDD 761>XP_006717537 Length = 1296 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 696 DDTVIIEDD 704>XP_005252589 Length = 1309 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 709 DDTVIIEDD 717>XP_006717536 Length = 1314 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 714 DDTVIIEDD 722>XP_006717535 Length = 1316 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 753 DDTVIIEDD 761>XP_006717534 Length = 1321 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 721 DDTVIIEDD 729>XP_005252588 Length = 1323 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 753 DDTVIIEDD 761>XP_005252587 Length = 1338 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 753 DDTVIIEDD 761>XP_005252585 Length = 1352 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 +DT+II+ D Sbjct: 753 DDTVIIEDD 761>NP_065777 Length = 704 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EDTIIIQQ 8 E+TII+QQ Sbjct: 275 ENTIILQQ 282>XP_006714724 Length = 681 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EDTIIIQQ 8 E+TII+QQ Sbjct: 252 ENTIILQQ 259>XP_005248616 Length = 686 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EDTIIIQQ 8 E+TII+QQ Sbjct: 275 ENTIILQQ 282>NP_001157915 Length = 1873 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EDTIIIQQD 9 EDTI+ QD Sbjct: 91 EDTILQSQD 99>NP_001017922 Length = 475 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDTIIIQ 7 EDT+I+Q Sbjct: 136 EDTVILQ 142>NP_061008 Length = 475 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDTIIIQ 7 EDT+I+Q Sbjct: 136 EDTVILQ 142>XP_006710376 Length = 475 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDTIIIQ 7 EDT+I+Q Sbjct: 136 EDTVILQ 142>XP_005270472 Length = 536 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EDTIIIQ 7 EDT+I+Q Sbjct: 197 EDTVILQ 203>NP_002687 Length = 172 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 ++ I+IQQD Sbjct: 132 DEDIVIQQD 140>NP_055023 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 EDTIIIQQD 9 ED ++Q+D Sbjct: 174 EDVAVVQED 182>NP_073751 Length = 472 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDTIIIQQD 9 EDT + +QD Sbjct: 224 EDTSVTEQD 232>NP_001106853 Length = 2093 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EDTIIIQQD 9 ++TI+IQ D Sbjct: 226 DETILIQTD 234>NP_005952 Length = 2439 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDTIIIQQD 9 +D I+I QD Sbjct: 460 QDKIVISQD 468>XP_006725823 Length = 1825 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDTIIIQQD 9 +D I+I QD Sbjct: 460 QDKIVISQD 468>XP_006725595 Length = 1311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDTIIIQQD 9 +D I+I QD Sbjct: 460 QDKIVISQD 468>XP_005258190 Length = 325 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDTIIIQQD 9 EDT + +QD Sbjct: 77 EDTSVTEQD 85>XP_005258189 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDTIIIQQD 9 EDT + +QD Sbjct: 224 EDTSVTEQD 232>XP_006722402 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EDTIIIQQD 9 EDT + +QD Sbjct: 224 EDTSVTEQD 232>NP_003592 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTIIIQQ 8 D+I+IQQ Sbjct: 628 DSIVIQQ 634>NP_001274734 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 EDTIIIQQ 8 E T+++QQ Sbjct: 224 EGTVVVQQ 231>NP_001269804 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTIIIQQ 8 D+I+IQQ Sbjct: 631 DSIVIQQ 637>NP_001269803 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTIIIQQ 8 D+I+IQQ Sbjct: 643 DSIVIQQ 649>NP_001020787 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 EDTIIIQQ 8 E T+++QQ Sbjct: 309 EGTVVVQQ 316>NP_003060 Length = 1054 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTIIIQQ 8 D+I+IQQ Sbjct: 643 DSIVIQQ 649>XP_006724845 Length = 1042 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTIIIQQ 8 D+I+IQQ Sbjct: 631 DSIVIQQ 637>XP_005262519 Length = 1048 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTIIIQQ 8 D+I+IQQ Sbjct: 643 DSIVIQQ 649>XP_005262518 Length = 1054 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DTIIIQQ 8 D+I+IQQ Sbjct: 643 DSIVIQQ 649>XP_005263320 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 EDTIIIQQ 8 E T+++QQ Sbjct: 309 EGTVVVQQ 316>NP_112595 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 EDTIIIQQ 8 E T+++QQ Sbjct: 216 EGTVVVQQ 223>NP_001036134 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 EDTIIIQQ 8 E T+++QQ Sbjct: 214 EGTVVVQQ 221Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.138 0.345 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 442,912 Number of extensions: 936 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |