Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001136098 20 390 NP_000360 20 390 NP_001018046 20 390 XP_005268096 20 390 XP_006720308 20 390 XP_005268094 20 390 NP_000224 17 3301 NP_776183 16 7355 XP_005259653 16 7355 XP_005246532 16 7355 XP_006712507 16 7355 XP_006712506 16 7355 XP_006712505 16 7355 XP_006712504 16 7355 XP_005246531 16 7355 NP_064555 16 7355 NP_001123214 15 9605 NP_115970 15 9605 NP_001124335 15 9605 NP_006200 15 9605 NP_001035181 15 9605 NP_714913 15 9605 XP_006716650 15 9605 XP_006716649 15 9605 XP_006716648 15 9605 XP_006716647 15 9605 XP_006715863 15 9605 XP_005249952 15 9605 XP_005249951 15 9605 XP_005262943 15 9605 XP_005262942 15 9605 NP_570603 15 9605 NP_055018 15 9605>NP_001136098 Length = 274 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EALTLKLYN 9 E LTLKLYN Sbjct: 178 ETLTLKLYN 186>NP_000360 Length = 764 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EALTLKLYN 9 E LTLKLYN Sbjct: 178 ETLTLKLYN 186>NP_001018046 Length = 253 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EALTLKLYN 9 E LTLKLYN Sbjct: 178 ETLTLKLYN 186>XP_005268096 Length = 253 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EALTLKLYN 9 E LTLKLYN Sbjct: 178 ETLTLKLYN 186>XP_006720308 Length = 274 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EALTLKLYN 9 E LTLKLYN Sbjct: 178 ETLTLKLYN 186>XP_005268094 Length = 764 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EALTLKLYN 9 E LTLKLYN Sbjct: 178 ETLTLKLYN 186>NP_000224 Length = 699 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EALTLKLY 8 E++TLKLY Sbjct: 175 ESVTLKLY 182>NP_776183 Length = 530 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EALTLKLYN 9 EAL L +YN Sbjct: 102 EALLLGIYN 110>XP_005259653 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EALTLKLYN 9 EALT +YN Sbjct: 420 EALTRVIYN 428>XP_005246532 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EALTLKLYN 9 EAL L +YN Sbjct: 20 EALLLGIYN 28>XP_006712507 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EALTLKLYN 9 EAL L +YN Sbjct: 102 EALLLGIYN 110>XP_006712506 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EALTLKLYN 9 EAL L +YN Sbjct: 102 EALLLGIYN 110>XP_006712505 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EALTLKLYN 9 EAL L +YN Sbjct: 102 EALLLGIYN 110>XP_006712504 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EALTLKLYN 9 EAL L +YN Sbjct: 102 EALLLGIYN 110>XP_005246531 Length = 586 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EALTLKLYN 9 EAL L +YN Sbjct: 102 EALLLGIYN 110>NP_064555 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EALTLKLYN 9 EALT +YN Sbjct: 420 EALTRVIYN 428>NP_001123214 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALTLKLYN 9 A+T+KLY+ Sbjct: 28 AVTVKLYS 35>NP_115970 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EALTLKLYN 9 EAL L +YN Sbjct: 102 EALLLGVYN 110>NP_001124335 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EALTLKLY 8 E LTLK Y Sbjct: 873 EILTLKTY 880>NP_006200 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EALTLKLY 8 E LTLK Y Sbjct: 900 EILTLKTY 907>NP_001035181 Length = 863 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EALTLKLY 8 E LTLK Y Sbjct: 848 EILTLKTY 855>NP_714913 Length = 293 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EALTLKLYN 9 EAL LYN Sbjct: 222 EALKFHLYN 230>XP_006716650 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EALTLKLY 8 E LTLK Y Sbjct: 896 EILTLKTY 903>XP_006716649 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EALTLKLY 8 E LTLK Y Sbjct: 921 EILTLKTY 928>XP_006716648 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EALTLKLY 8 E LTLK Y Sbjct: 921 EILTLKTY 928>XP_006716647 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EALTLKLY 8 E LTLK Y Sbjct: 925 EILTLKTY 932>XP_006715863 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EALTLKLYN 9 EAL L +YN Sbjct: 102 EALLLGVYN 110>XP_005249952 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EALTLKLYN 9 EAL L +YN Sbjct: 102 EALLLGVYN 110>XP_005249951 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EALTLKLYN 9 EAL L +YN Sbjct: 102 EALLLGVYN 110>XP_005262943 Length = 293 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EALTLKLYN 9 EAL LYN Sbjct: 222 EALKFHLYN 230>XP_005262942 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 EALTLKLYN 9 EAL LYN Sbjct: 234 EALKFHLYN 242>NP_570603 Length = 955 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EALTLKL 7 +ALTLKL Sbjct: 829 QALTLKL 835>NP_055018 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EALTLKL 7 +ALTLKL Sbjct: 851 QALTLKL 857Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.132 0.338 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 413,450 Number of extensions: 523 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |