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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004110                                                              18    1935
NP_001175                                                              16    5631
NP_005948                                                              15    9605
NP_001265166                                                           15    9605
NP_001399                                                              15    9605
NP_055069                                                              15    9605
XP_006719258                                                           15    9605
XP_005268620                                                           15    9605
XP_005268619                                                           15    9605
XP_005263520                                                           15    9605
XP_005263519                                                           15    9605
XP_005263518                                                           15    9605
XP_005263517                                                           15    9605
XP_005263515                                                           15    9605
XP_006710468                                                           15    9605
XP_005270637                                                           15    9605

>NP_004110
          Length = 993

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   EALMSVLKM 9
           EALMS LKM
Sbjct: 656 EALMSELKM 664



>NP_001175
          Length = 2644

 Score = 16.2 bits (30), Expect =  5631
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1    EALMSVLK 8
            E LMSVLK
Sbjct: 2548 EPLMSVLK 2555



>NP_005948
          Length = 656

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   EALMSVLK 8
           EAL+ VLK
Sbjct: 523 EALLQVLK 530



>NP_001265166
          Length = 183

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  EALMSVLK 8
          +ALM++LK
Sbjct: 23 QALMNILK 30



>NP_001399
          Length = 2923

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1    EALMSVL 7
            EA+MSVL
Sbjct: 1095 EAIMSVL 1101



>NP_055069
          Length = 443

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   EALMSVLK 8
           +ALM++LK
Sbjct: 283 QALMNILK 290



>XP_006719258
          Length = 183

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1  EALMSVLK 8
          +ALM++LK
Sbjct: 23 QALMNILK 30



>XP_005268620
          Length = 340

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   EALMSVLK 8
           +ALM++LK
Sbjct: 180 QALMNILK 187



>XP_005268619
          Length = 340

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   EALMSVLK 8
           +ALM++LK
Sbjct: 180 QALMNILK 187



>XP_005263520
          Length = 574

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   EALMSVLK 8
           EAL+ VLK
Sbjct: 441 EALLQVLK 448



>XP_005263519
          Length = 656

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   EALMSVLK 8
           EAL+ VLK
Sbjct: 523 EALLQVLK 530



>XP_005263518
          Length = 656

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   EALMSVLK 8
           EAL+ VLK
Sbjct: 523 EALLQVLK 530



>XP_005263517
          Length = 656

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   EALMSVLK 8
           EAL+ VLK
Sbjct: 523 EALLQVLK 530



>XP_005263515
          Length = 697

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   EALMSVLK 8
           EAL+ VLK
Sbjct: 564 EALLQVLK 571



>XP_006710468
          Length = 2916

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1    EALMSVL 7
            EA+MSVL
Sbjct: 1095 EAIMSVL 1101



>XP_005270637
          Length = 2921

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1    EALMSVL 7
            EA+MSVL
Sbjct: 1095 EAIMSVL 1101



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.323    0.126    0.282 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 187,007
Number of extensions: 139
Number of successful extensions: 16
Number of sequences better than 10000.0: 16
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 16
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.0 bits)
S2: 28 (15.4 bits)