Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 18 1135 NP_001087241 18 1135 XP_005265799 18 1135 XP_005265798 18 1135 XP_005265797 18 1135 NP_005202 18 1482 NP_001275634 18 1482 NP_006197 17 3301 NP_002600 17 3301 XP_005268521 17 3301 XP_006714104 17 3301 XP_005265800 17 3301 XP_006714103 17 3301 XP_006714102 17 3301 NP_001035275 17 4312 XP_006723530 17 4312 XP_006723529 17 4312 NP_002011 16 5631 NP_891555 16 5631 NP_002244 16 5631 NP_775821 16 5631 XP_005251455 16 5631 XP_005251456 16 5631 XP_005251454 16 5631 NP_996898 15 9605 NP_002010 15 9605 NP_001166126 15 9605 NP_060730 15 9605 NP_002733 15 9605 NP_001139754 15 9605 XP_005268081 15 9605 XP_005267916 15 9605 XP_005247321 15 9605 XP_006713623 15 9605 NP_003127 15 9605>NP_000213 Length = 976 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EALMSKLKV 9 EALMS+LKV Sbjct: 635 EALMSELKV 643>NP_001087241 Length = 972 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EALMSKLKV 9 EALMS+LKV Sbjct: 631 EALMSELKV 639>XP_005265799 Length = 973 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EALMSKLKV 9 EALMS+LKV Sbjct: 632 EALMSELKV 640>XP_005265798 Length = 976 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EALMSKLKV 9 EALMS+LKV Sbjct: 636 EALMSELKV 644>XP_005265797 Length = 977 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EALMSKLKV 9 EALMS+LKV Sbjct: 636 EALMSELKV 644>NP_005202 Length = 972 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 EALMSKLKV 9 EALMS+LK+ Sbjct: 628 EALMSELKI 636>NP_001275634 Length = 972 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 EALMSKLKV 9 EALMS+LK+ Sbjct: 628 EALMSELKI 636>NP_006197 Length = 1089 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EALMSKLKV 9 +ALMS+LK+ Sbjct: 639 QALMSELKI 647>NP_002600 Length = 1106 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EALMSKLKV 9 +ALMS+LK+ Sbjct: 646 QALMSELKI 654>XP_005268521 Length = 1042 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EALMSKLKV 9 +ALMS+LK+ Sbjct: 582 QALMSELKI 590>XP_006714104 Length = 832 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EALMSKLKV 9 +ALMS+LK+ Sbjct: 664 QALMSELKI 672>XP_005265800 Length = 1089 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EALMSKLKV 9 +ALMS+LK+ Sbjct: 639 QALMSELKI 647>XP_006714103 Length = 1111 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EALMSKLKV 9 +ALMS+LK+ Sbjct: 661 QALMSELKI 669>XP_006714102 Length = 1114 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EALMSKLKV 9 +ALMS+LK+ Sbjct: 664 QALMSELKI 672>NP_001035275 Length = 523 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EALMSKLK 8 EALM+K+K Sbjct: 110 EALMTKIK 117>XP_006723530 Length = 470 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EALMSKLK 8 EALM+K+K Sbjct: 57 EALMTKIK 64>XP_006723529 Length = 523 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EALMSKLK 8 EALM+K+K Sbjct: 110 EALMTKIK 117>NP_002011 Length = 1298 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALMSKLKV 9 ALMS+LK+ Sbjct: 892 ALMSELKI 899>NP_891555 Length = 1363 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALMSKLKV 9 ALMS+LK+ Sbjct: 892 ALMSELKI 899>NP_002244 Length = 1356 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALMSKLKV 9 ALMS+LK+ Sbjct: 881 ALMSELKI 888>NP_775821 Length = 1326 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EALMSKLKV 9 EAL+S LKV Sbjct: 521 EALISTLKV 529>XP_005251455 Length = 1334 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EALMSKLKV 9 EAL+S LKV Sbjct: 529 EALISTLKV 537>XP_005251456 Length = 1334 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EALMSKLKV 9 EAL+S LKV Sbjct: 529 EALISTLKV 537>XP_005251454 Length = 1334 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EALMSKLKV 9 EAL+S LKV Sbjct: 529 EALISTLKV 537>NP_996898 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALMSKLK 8 ALMSK+K Sbjct: 476 ALMSKVK 482>NP_002010 Length = 1338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EALMSKLKV 9 +ALM++LK+ Sbjct: 873 KALMTELKI 881>NP_001166126 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EALMSKLK 8 EALM+K K Sbjct: 176 EALMTKTK 183>NP_060730 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EALMSKLK 8 EALM+K K Sbjct: 110 EALMTKTK 117>NP_002733 Length = 912 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LMSKLKV 9 LMSK+KV Sbjct: 263 LMSKVKV 269>NP_001139754 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EALMSKLK 8 EAL+ KLK Sbjct: 267 EALIEKLK 274>XP_005268081 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EALMSKLK 8 EAL+ KLK Sbjct: 316 EALIEKLK 323>XP_005267916 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LMSKLKV 9 LMSK+KV Sbjct: 271 LMSKVKV 277>XP_005247321 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALMSKLK 8 ALMSK+K Sbjct: 476 ALMSKVK 482>XP_006713623 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALMSKLK 8 ALMSK+K Sbjct: 459 ALMSKVK 465>NP_003127 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EALMSKLK 8 EAL+ KLK Sbjct: 316 EALIEKLK 323Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.122 0.272 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 242,432 Number of extensions: 309 Number of successful extensions: 35 Number of sequences better than 10000.0: 35 Number of HSP's gapped: 35 Number of HSP's successfully gapped: 35 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |