Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 18 1482 NP_000242 18 1482 XP_005264389 18 1482 NP_997294 17 3301 NP_060791 17 3301 NP_000912 17 4312 NP_004332 17 4312 NP_006763 17 4312 XP_006719149 17 4312 XP_005264615 17 4312 XP_006712164 17 4312 XP_005264614 17 4312 XP_005264613 17 4312 XP_005264612 17 4312 NP_057333 16 5631 NP_872305 16 7355 NP_001091945 16 7355 NP_783863 16 7355 NP_060688 16 7355 NP_944489 16 7355 XP_005269276 16 7355 XP_006719749 16 7355 XP_005269275 16 7355 XP_005246145 16 7355 XP_006712675 16 7355 XP_006711218 16 7355 XP_006711217 16 7355 NP_919224 15 9605 NP_919303 15 9605 NP_004793 15 9605 NP_919304 15 9605 NP_000172 15 9605 NP_001274418 15 9605 NP_001116108 15 9605 NP_068580 15 9605 NP_006505 15 9605 XP_005250354 15 9605 XP_005265428 15 9605 XP_005264701 15 9605>NP_001245210 Length = 868 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIQIGPK 9 LIQIGPK Sbjct: 125 LIQIGPK 131>NP_000242 Length = 934 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIQIGPK 9 LIQIGPK Sbjct: 191 LIQIGPK 197>XP_005264389 Length = 921 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIQIGPK 9 LIQIGPK Sbjct: 191 LIQIGPK 197>NP_997294 Length = 686 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EALIQIGP 8 EAL+Q GP Sbjct: 116 EALLQTGP 123>NP_060791 Length = 353 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALIQIGPK 9 AL++IGP+ Sbjct: 228 ALVEIGPR 235>NP_000912 Length = 1141 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EALIQIG 7 EAL+QIG Sbjct: 171 EALVQIG 177>NP_004332 Length = 2225 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EALIQIGP 8 EAL QIGP Sbjct: 1438 EALGQIGP 1445>NP_006763 Length = 1343 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EALIQIGP 8 EAL+++GP Sbjct: 706 EALLKLGP 713>XP_006719149 Length = 1087 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EALIQIG 7 EAL+QIG Sbjct: 171 EALVQIG 177>XP_005264615 Length = 2162 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EALIQIGP 8 EAL QIGP Sbjct: 1375 EALGQIGP 1382>XP_006712164 Length = 2179 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EALIQIGP 8 EAL QIGP Sbjct: 1375 EALGQIGP 1382>XP_005264614 Length = 2191 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EALIQIGP 8 EAL QIGP Sbjct: 1438 EALGQIGP 1445>XP_005264613 Length = 2208 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EALIQIGP 8 EAL QIGP Sbjct: 1438 EALGQIGP 1445>XP_005264612 Length = 2242 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EALIQIGP 8 EAL QIGP Sbjct: 1438 EALGQIGP 1445>NP_057333 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALIQIGP 8 ALI++GP Sbjct: 196 ALIEVGP 202>NP_872305 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALIQIGPK 9 A+IQ+ PK Sbjct: 138 AIIQLAPK 145>NP_001091945 Length = 366 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALIQIGPK 9 A+IQ+ PK Sbjct: 138 AIIQLAPK 145>NP_783863 Length = 1027 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EALIQIGP 8 EAL ++GP Sbjct: 484 EALARVGP 491>NP_060688 Length = 1247 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EALIQIGPK 9 EAL +GP+ Sbjct: 79 EALFSLGPE 87>NP_944489 Length = 976 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EALIQIGP 8 EAL ++GP Sbjct: 433 EALARVGP 440>XP_005269276 Length = 925 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EALIQIGP 8 EAL ++GP Sbjct: 381 EALARVGP 388>XP_006719749 Length = 977 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EALIQIGP 8 EAL ++GP Sbjct: 433 EALARVGP 440>XP_005269275 Length = 1028 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EALIQIGP 8 EAL ++GP Sbjct: 484 EALARVGP 491>XP_005246145 Length = 1236 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EALIQIGPK 9 EAL +GP+ Sbjct: 67 EALFSLGPE 75>XP_006712675 Length = 1248 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EALIQIGPK 9 EAL +GP+ Sbjct: 79 EALFSLGPE 87>XP_006711218 Length = 376 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALIQIGPK 9 A+IQ+ PK Sbjct: 163 AIIQLAPK 170>XP_006711217 Length = 391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALIQIGPK 9 A+IQ+ PK Sbjct: 163 AIIQLAPK 170>NP_919224 Length = 1997 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LIQIGP 8 L+QIGP Sbjct: 1094 LLQIGP 1099>NP_919303 Length = 1307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LIQIGP 8 L+QIGP Sbjct: 404 LLQIGP 409>NP_004793 Length = 1230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LIQIGP 8 L+QIGP Sbjct: 347 LLQIGP 352>NP_919304 Length = 1230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LIQIGP 8 L+QIGP Sbjct: 347 LLQIGP 352>NP_000172 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 LIQIGP 8 L+Q+GP Sbjct: 156 LVQVGP 161>NP_001274418 Length = 1997 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LIQIGP 8 L+QIGP Sbjct: 1094 LLQIGP 1099>NP_001116108 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 EALIQIGP 8 + L+Q+GP Sbjct: 506 DGLLQLGP 513>NP_068580 Length = 237 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 EALIQIGP 8 + L+Q+GP Sbjct: 140 DGLLQLGP 147>NP_006505 Length = 1956 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EALIQIG 7 EA++QIG Sbjct: 694 EAMLQIG 700>XP_005250354 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 LIQIGP 8 L+Q+GP Sbjct: 156 LVQVGP 161>XP_005265428 Length = 1959 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EALIQIG 7 EA++QIG Sbjct: 697 EAMLQIG 703>XP_005264701 Length = 1992 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LIQIGP 8 L+QIGP Sbjct: 1109 LLQIGP 1114Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.142 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 547,339 Number of extensions: 703 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |