Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 18 1135 NP_001129157 16 5631 NP_996844 16 5631 XP_005254439 16 5631 XP_006720568 16 5631 XP_005254438 16 5631 NP_002335 16 5631 NP_056190 16 7355 NP_955749 16 7355 NP_598328 15 9605 NP_003169 15 9605 NP_443076 15 9605 NP_008905 15 9605 NP_008886 15 9605 NP_001265108 15 9605 NP_001265106 15 9605 NP_001265105 15 9605 NP_001265103 15 9605 NP_001265102 15 9605 NP_001265100 15 9605 NP_001265099 15 9605 NP_065904 15 9605 NP_056081 15 9605 NP_001247420 15 9605 NP_001265104 15 9605 NP_001265107 15 9605 NP_006409 15 9605 XP_006723819 15 9605 XP_006718031 15 9605 XP_006718030 15 9605 XP_006718029 15 9605 XP_005271882 15 9605 XP_006718028 15 9605 XP_006718027 15 9605 XP_006713376 15 9605 XP_006713375 15 9605 XP_006713374 15 9605 NP_008885 15 9605>NP_004295 Length = 1620 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EALIISKLN 9 EALIISK N Sbjct: 1167 EALIISKFN 1175>NP_001129157 Length = 734 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 EALIISK 7 EALIISK Sbjct: 431 EALIISK 437>NP_996844 Length = 803 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 EALIISK 7 EALIISK Sbjct: 500 EALIISK 506>XP_005254439 Length = 475 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 EALIISK 7 EALIISK Sbjct: 172 EALIISK 178>XP_006720568 Length = 771 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 EALIISK 7 EALIISK Sbjct: 468 EALIISK 474>XP_005254438 Length = 819 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 EALIISK 7 EALIISK Sbjct: 516 EALIISK 522>NP_002335 Length = 864 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 EALIISK 7 EALIISK Sbjct: 561 EALIISK 567>NP_056190 Length = 929 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EALIISKLN 9 + LIIS+LN Sbjct: 465 QELIISRLN 473>NP_955749 Length = 884 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EALIISKLN 9 + LIIS+LN Sbjct: 465 QELIISRLN 473>NP_598328 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 409 LVISKMN 415>NP_003169 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 409 LVISKMN 415>NP_443076 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EALIISKLN 9 EA++I +LN Sbjct: 116 EAMVIRELN 124>NP_008905 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 154 LVISKIN 160>NP_008886 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 155 LVISKIN 161>NP_001265108 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 43 LVISKIN 49>NP_001265106 Length = 832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 176 LVISKIN 182>NP_001265105 Length = 768 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 112 LVISKIN 118>NP_001265103 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 43 LVISKIN 49>NP_001265102 Length = 829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 173 LVISKIN 179>NP_001265100 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 43 LVISKIN 49>NP_001265099 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 161 LVISKIN 167>NP_065904 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALIISKLN 9 AL++SKL+ Sbjct: 574 ALVVSKLS 581>NP_056081 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EALIISKLN 9 +A +ISKLN Sbjct: 178 QADVISKLN 186>NP_001247420 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EALIISKLN 9 +A +ISKLN Sbjct: 194 QADVISKLN 202>NP_001265104 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 77 LVISKIN 83>NP_001265107 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 43 LVISKIN 49>NP_006409 Length = 510 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 ++ISKLN Sbjct: 405 MVISKLN 411>XP_006723819 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EALIISKLN 9 +A +ISKLN Sbjct: 178 QADVISKLN 186>XP_006718031 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 43 LVISKIN 49>XP_006718030 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 43 LVISKIN 49>XP_006718029 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 43 LVISKIN 49>XP_005271882 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 43 LVISKIN 49>XP_006718028 Length = 791 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 168 LVISKIN 174>XP_006718027 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 169 LVISKIN 175>XP_006713376 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 152 LVISKMN 158>XP_006713375 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 248 LVISKMN 254>XP_006713374 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 409 LVISKMN 415>NP_008885 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIISKLN 9 L+ISK+N Sbjct: 155 LVISKIN 161Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.134 0.307 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 246,240 Number of extensions: 232 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |