Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245200 19 869 NP_000240 19 869 NP_001161089 19 869 XP_005265218 19 869 NP_958934 16 5631 NP_005536 16 5631 NP_060848 16 5631 NP_001129494 16 7355 NP_001185896 16 7355 NP_000903 16 7355 NP_001269833 16 7355 NP_001131145 16 7355 NP_703194 16 7355 NP_060090 16 7355 NP_036350 16 7355 NP_004507 16 7355 NP_060857 16 7355 NP_001164608 16 7355 NP_620711 16 7355 XP_006722805 16 7355 XP_005252142 16 7355 XP_005252140 16 7355 XP_005251309 16 7355 XP_005247007 16 7355 NP_001128527 15 9605 NP_001244957 15 9605 NP_001055 15 9605 NP_001138775 15 9605 NP_653287 15 9605 NP_057191 15 9605 NP_001252541 15 9605 NP_057368 15 9605 NP_996882 15 9605 NP_004506 15 9605 NP_001254738 15 9605 NP_066013 15 9605 XP_006726250 15 9605 XP_006726210 15 9605 XP_006726112 15 9605 XP_006726013 15 9605 XP_006725925 15 9605 XP_006725825 15 9605 XP_006725698 15 9605 XP_006714540 15 9605 XP_006713382 15 9605>NP_001245200 Length = 687 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 EALASISH 8 EALASISH Sbjct: 102 EALASISH 109>NP_000240 Length = 756 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 EALASISH 8 EALASISH Sbjct: 102 EALASISH 109>NP_001161089 Length = 658 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 EALASISH 8 EALASISH Sbjct: 4 EALASISH 11>XP_005265218 Length = 687 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 EALASISH 8 EALASISH Sbjct: 102 EALASISH 109>NP_958934 Length = 428 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALASISH 8 ALAS+SH Sbjct: 93 ALASLSH 99>NP_005536 Length = 428 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALASISH 8 ALAS+SH Sbjct: 93 ALASLSH 99>NP_060848 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LASISHA 9 LAS+SHA Sbjct: 200 LASLSHA 206>NP_001129494 Length = 964 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALASISH 8 +LASISH Sbjct: 12 SLASISH 18>NP_001185896 Length = 857 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ALASISH 8 +LASISH Sbjct: 12 SLASISH 18>NP_000903 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EALASISHA 9 EAL S SH+ Sbjct: 297 EALGSTSHS 305>NP_001269833 Length = 291 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EALASISHA 9 EAL S SH+ Sbjct: 208 EALGSTSHS 216>NP_001131145 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALASISHA 9 ALAS+ HA Sbjct: 206 ALASLRHA 213>NP_703194 Length = 690 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALASISHA 9 ALAS+ HA Sbjct: 206 ALASLRHA 213>NP_060090 Length = 898 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALASISHA 9 ALAS+ HA Sbjct: 206 ALASLRHA 213>NP_036350 Length = 894 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALASISHA 9 ALAS+ HA Sbjct: 206 ALASLRHA 213>NP_004507 Length = 702 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALASISHA 9 ALAS+ HA Sbjct: 206 ALASLRHA 213>NP_060857 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALASISHA 9 ALAS+ HA Sbjct: 198 ALASLRHA 205>NP_001164608 Length = 658 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALASISHA 9 ALAS+ HA Sbjct: 184 ALASLRHA 191>NP_620711 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALASISHA 9 A+ASI HA Sbjct: 693 AIASIRHA 700>XP_006722805 Length = 855 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALASISHA 9 ALAS+ HA Sbjct: 206 ALASLRHA 213>XP_005252142 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALASISHA 9 ALAS+ HA Sbjct: 198 ALASLRHA 205>XP_005252140 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALASISHA 9 ALAS+ HA Sbjct: 198 ALASLRHA 205>XP_005251309 Length = 366 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EALASISHA 9 EAL S SH+ Sbjct: 283 EALGSTSHS 291>XP_005247007 Length = 696 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALASISHA 9 A+ASI HA Sbjct: 652 AIASIRHA 659>NP_001128527 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EALASISHA 9 +ALA + HA Sbjct: 323 QALAKLGHA 331>NP_001244957 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EALASISHA 9 +ALA + HA Sbjct: 331 QALAKLGHA 339>NP_001055 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EALASISHA 9 +ALA + HA Sbjct: 323 QALAKLGHA 331>NP_001138775 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EALASISH 8 EAL S SH Sbjct: 286 EALTSYSH 293>NP_653287 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EALASISH 8 EAL S SH Sbjct: 280 EALTSYSH 287>NP_057191 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EALASISHA 9 +ALA++ HA Sbjct: 901 DALAALRHA 909>NP_001252541 Length = 2371 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LASISH 8 LASISH Sbjct: 970 LASISH 975>NP_057368 Length = 2376 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LASISH 8 LASISH Sbjct: 975 LASISH 980>NP_996882 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LASISH 8 LASISH Sbjct: 975 LASISH 980>NP_004506 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALASISHA 9 ALA+I HA Sbjct: 201 ALAAIRHA 208>NP_001254738 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ALASISHA 9 ALA+I HA Sbjct: 163 ALAAIRHA 170>NP_066013 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EALASISH 8 EAL S++H Sbjct: 225 EALLSVAH 232>XP_006726250 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EALASISH 8 EAL S SH Sbjct: 190 EALTSYSH 197>XP_006726210 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EALASISH 8 EAL S SH Sbjct: 190 EALTSYSH 197>XP_006726112 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EALASISH 8 EAL S SH Sbjct: 190 EALTSYSH 197>XP_006726013 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EALASISH 8 EAL S SH Sbjct: 190 EALTSYSH 197>XP_006725925 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EALASISH 8 EAL S SH Sbjct: 190 EALTSYSH 197>XP_006725825 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EALASISH 8 EAL S SH Sbjct: 190 EALTSYSH 197>XP_006725698 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EALASISH 8 EAL S SH Sbjct: 190 EALTSYSH 197>XP_006714540 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EALASISHA 9 +ALA++ HA Sbjct: 857 DALAALRHA 865>XP_006713382 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EALASISHA 9 +ALA + HA Sbjct: 323 QALAKLGHA 331Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.109 0.260 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 405,668 Number of extensions: 519 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |