Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 19 869 NP_444254 19 869 NP_444253 19 869 NP_444255 19 869 NP_444260 19 869 XP_005247551 19 869 XP_005247550 19 869 XP_005247549 19 869 NP_444259 17 2528 XP_006713712 17 2528 NP_001269828 17 4312 NP_001269829 17 4312 NP_001269830 17 4312 NP_001093867 17 4312 NP_008954 17 4312 XP_006712269 17 4312 XP_006712268 17 4312 XP_005246303 17 4312 NP_064506 16 5631 NP_817123 16 5631 NP_001127925 16 5631 XP_006717797 16 7355 NP_777567 16 7355 NP_056005 16 7355 NP_003267 15 9605 NP_783195 15 9605 NP_006522 15 9605 NP_848611 15 9605 NP_001073920 15 9605 XP_005266612 15 9605 XP_006719933 15 9605 XP_006719932 15 9605 XP_005266610 15 9605 XP_005266609 15 9605 XP_005266608 15 9605 XP_005266607 15 9605 XP_005266606 15 9605 XP_005266605 15 9605 XP_005266604 15 9605 XP_005266603 15 9605>NP_444256 Length = 1794 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EADVSQAFL 9 E DVSQAFL Sbjct: 1669 EEDVSQAFL 1677>NP_444254 Length = 1845 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EADVSQAFL 9 E DVSQAFL Sbjct: 1720 EEDVSQAFL 1728>NP_444253 Length = 1914 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EADVSQAFL 9 E DVSQAFL Sbjct: 1789 EEDVSQAFL 1797>NP_444255 Length = 1863 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EADVSQAFL 9 E DVSQAFL Sbjct: 1738 EEDVSQAFL 1746>NP_444260 Length = 154 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EADVSQAFL 9 E DVSQAFL Sbjct: 29 EEDVSQAFL 37>XP_005247551 Length = 1855 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EADVSQAFL 9 E DVSQAFL Sbjct: 1730 EEDVSQAFL 1738>XP_005247550 Length = 1856 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EADVSQAFL 9 E DVSQAFL Sbjct: 1731 EEDVSQAFL 1739>XP_005247549 Length = 1924 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EADVSQAFL 9 E DVSQAFL Sbjct: 1799 EEDVSQAFL 1807>NP_444259 Length = 153 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 DVSQAFL 9 DVSQAFL Sbjct: 30 DVSQAFL 36>XP_006713712 Length = 1923 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 DVSQAFL 9 DVSQAFL Sbjct: 1800 DVSQAFL 1806>NP_001269828 Length = 858 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 EADVSQAFL 9 E DVS AFL Sbjct: 441 EDDVSMAFL 449>NP_001269829 Length = 840 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 EADVSQAFL 9 E DVS AFL Sbjct: 423 EDDVSMAFL 431>NP_001269830 Length = 791 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 EADVSQAFL 9 E DVS AFL Sbjct: 374 EDDVSMAFL 382>NP_001093867 Length = 867 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 EADVSQAFL 9 E DVS AFL Sbjct: 450 EDDVSMAFL 458>NP_008954 Length = 1011 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 EADVSQAFL 9 E DVS AFL Sbjct: 594 EDDVSMAFL 602>XP_006712269 Length = 838 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 EADVSQAFL 9 E DVS AFL Sbjct: 421 EDDVSMAFL 429>XP_006712268 Length = 840 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 EADVSQAFL 9 E DVS AFL Sbjct: 423 EDDVSMAFL 431>XP_005246303 Length = 993 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 EADVSQAFL 9 E DVS AFL Sbjct: 576 EDDVSMAFL 584>NP_064506 Length = 1516 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EADVSQAFL 9 E D+S+AF+ Sbjct: 547 EFDISEAFI 555>NP_817123 Length = 1040 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EADVSQAFL 9 +AD++ AFL Sbjct: 771 DADINMAFL 779>NP_001127925 Length = 1059 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EADVSQAFL 9 +AD++ AFL Sbjct: 790 DADINMAFL 798>XP_006717797 Length = 238 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ADVSQAFL 9 AD+ QA+L Sbjct: 128 ADIKQAYL 135>NP_777567 Length = 417 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EADVSQA 7 E+DVSQA Sbjct: 348 ESDVSQA 354>NP_056005 Length = 260 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ADVSQAFL 9 AD+ QA+L Sbjct: 128 ADIKQAYL 135>NP_003267 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EADVSQA 7 +AD+SQA Sbjct: 594 QADISQA 600>NP_783195 Length = 833 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EADVSQAF 8 E D SQAF Sbjct: 608 EGDKSQAF 615>NP_006522 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EADVSQAF 8 E D SQAF Sbjct: 599 EGDKSQAF 606>NP_848611 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EADVSQ 6 EADVSQ Sbjct: 359 EADVSQ 364>NP_001073920 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 EADVSQAF 8 EAD+ Q F Sbjct: 112 EADIHQGF 119>XP_005266612 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EADVSQAF 8 E D SQAF Sbjct: 580 EGDKSQAF 587>XP_006719933 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EADVSQAF 8 E D SQAF Sbjct: 599 EGDKSQAF 606>XP_006719932 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EADVSQAF 8 E D SQAF Sbjct: 599 EGDKSQAF 606>XP_005266610 Length = 833 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EADVSQAF 8 E D SQAF Sbjct: 608 EGDKSQAF 615>XP_005266609 Length = 843 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EADVSQAF 8 E D SQAF Sbjct: 656 EGDKSQAF 663>XP_005266608 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EADVSQAF 8 E D SQAF Sbjct: 656 EGDKSQAF 663>XP_005266607 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EADVSQAF 8 E D SQAF Sbjct: 619 EGDKSQAF 626>XP_005266606 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EADVSQAF 8 E D SQAF Sbjct: 622 EGDKSQAF 629>XP_005266605 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EADVSQAF 8 E D SQAF Sbjct: 627 EGDKSQAF 634>XP_005266604 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EADVSQAF 8 E D SQAF Sbjct: 637 EGDKSQAF 644>XP_005266603 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EADVSQAF 8 E D SQAF Sbjct: 656 EGDKSQAF 663Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.125 0.308 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 352,519 Number of extensions: 447 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |