Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 20 509 NP_001909 18 1935 XP_005270603 18 1935 XP_005270602 18 1935 NP_001252541 17 4312 NP_057368 17 4312 NP_006827 17 4312 NP_036602 16 7355 NP_006421 16 7355 NP_000688 16 7355 NP_001243650 16 7355 NP_003777 16 7355 NP_057595 16 7355 NP_009194 16 7355 NP_114416 16 7355 NP_955474 16 7355 XP_005257820 16 7355 XP_006715974 16 7355 NP_115514 16 7355 NP_690867 16 7355 NP_004949 15 9605 NP_997320 15 9605 NP_861441 15 9605 NP_612364 15 9605 NP_001239200 15 9605 NP_001138495 15 9605 NP_689923 15 9605 NP_001006606 15 9605 NP_689634 15 9605 NP_001239199 15 9605 NP_001239198 15 9605 XP_005257833 15 9605 XP_006722227 15 9605 XP_005253612 15 9605 XP_006717764 15 9605 XP_006717763 15 9605 XP_006717762 15 9605 XP_005269673 15 9605 XP_005269672 15 9605 XP_006717761 15 9605 XP_006717760 15 9605 XP_006717759 15 9605 XP_006717017 15 9605 XP_005268434 15 9605 XP_006714819 15 9605 XP_005263496 15 9605 XP_005263495 15 9605>NP_004295 Length = 1620 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EAALGLLQF 9 EAA+GLLQF Sbjct: 160 EAAVGLLQF 168>NP_001909 Length = 482 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 AALGLLQF 9 A+LGLLQF Sbjct: 315 ASLGLLQF 322>XP_005270603 Length = 301 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 AALGLLQF 9 A+LGLLQF Sbjct: 134 ASLGLLQF 141>XP_005270602 Length = 301 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 AALGLLQF 9 A+LGLLQF Sbjct: 134 ASLGLLQF 141>NP_001252541 Length = 2371 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 AALGLLQ 8 AALGLLQ Sbjct: 1652 AALGLLQ 1658>NP_057368 Length = 2376 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 AALGLLQ 8 AALGLLQ Sbjct: 1657 AALGLLQ 1663>NP_006827 Length = 2671 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 EAALGLL 7 EAALGLL Sbjct: 856 EAALGLL 862>NP_036602 Length = 923 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EAALGLLQ 8 EAA+GLL+ Sbjct: 556 EAAVGLLK 563>NP_006421 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EAALGLLQF 9 +A +GL+QF Sbjct: 243 KAKIGLIQF 251>NP_000688 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGLLQF 9 LGLLQF Sbjct: 57 LGLLQF 62>NP_001243650 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EAALGLLQF 9 +A +GL+QF Sbjct: 213 KAKIGLIQF 221>NP_003777 Length = 1527 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AALGLLQ 8 AALG+LQ Sbjct: 1016 AALGILQ 1022>NP_057595 Length = 280 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 AALGLLQF 9 AALGLL F Sbjct: 66 AALGLLFF 73>NP_009194 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EAALGLLQ 8 EAA GLLQ Sbjct: 233 EAAEGLLQ 240>NP_114416 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALGLLQF 9 ALGLL+F Sbjct: 145 ALGLLKF 151>NP_955474 Length = 257 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EAALGLLQ 8 EAA GLLQ Sbjct: 182 EAAEGLLQ 189>XP_005257820 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AALGLLQ 8 AALG+LQ Sbjct: 952 AALGILQ 958>XP_006715974 Length = 875 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EAALGLLQ 8 EAA+GLL+ Sbjct: 508 EAAVGLLK 515>NP_115514 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGLLQF 9 LGLLQF Sbjct: 602 LGLLQF 607>NP_690867 Length = 674 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGLLQF 9 LGLLQF Sbjct: 602 LGLLQF 607>NP_004949 Length = 2549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EAALGLLQF 9 EAA G+L++ Sbjct: 1427 EAAAGVLEY 1435>NP_997320 Length = 4471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EAALGLLQF 9 +A LG+L+F Sbjct: 3232 KAGLGMLKF 3240>NP_861441 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AALGLLQF 9 AALG L+F Sbjct: 314 AALGYLRF 321>NP_612364 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EAALGLLQ 8 +AALGL++ Sbjct: 363 QAALGLME 370>NP_001239200 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ALGLLQF 9 A+GLL+F Sbjct: 247 AIGLLEF 253>NP_001138495 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EAALGLLQ 8 +AALGL++ Sbjct: 363 QAALGLME 370>NP_689923 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EAALGLLQ 8 + ALGLLQ Sbjct: 260 DLALGLLQ 267>NP_001006606 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ALGLLQF 9 A+GLL+F Sbjct: 272 AIGLLEF 278>NP_689634 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ALGLLQF 9 A+GLL+F Sbjct: 275 AIGLLEF 281>NP_001239199 Length = 369 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ALGLLQF 9 A+GLL+F Sbjct: 213 AIGLLEF 219>NP_001239198 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ALGLLQF 9 A+GLL+F Sbjct: 227 AIGLLEF 233>XP_005257833 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EAALGLLQ 8 +AALGL++ Sbjct: 363 QAALGLME 370>XP_006722227 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EAALGLLQ 8 +AALGL++ Sbjct: 371 QAALGLME 378>XP_005253612 Length = 4589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EAALGLLQF 9 +A LG+L+F Sbjct: 3350 KAGLGMLKF 3358>XP_006717764 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EAALGLLQ 8 + ALGLLQ Sbjct: 140 DLALGLLQ 147>XP_006717763 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EAALGLLQ 8 + ALGLLQ Sbjct: 172 DLALGLLQ 179>XP_006717762 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EAALGLLQ 8 + ALGLLQ Sbjct: 173 DLALGLLQ 180>XP_005269673 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EAALGLLQ 8 + ALGLLQ Sbjct: 259 DLALGLLQ 266>XP_005269672 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EAALGLLQ 8 + ALGLLQ Sbjct: 260 DLALGLLQ 267>XP_006717761 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EAALGLLQ 8 + ALGLLQ Sbjct: 292 DLALGLLQ 299>XP_006717760 Length = 401 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EAALGLLQ 8 + ALGLLQ Sbjct: 259 DLALGLLQ 266>XP_006717759 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EAALGLLQ 8 + ALGLLQ Sbjct: 291 DLALGLLQ 298>XP_006717017 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ALGLLQF 9 A+GLL+F Sbjct: 278 AIGLLEF 284>XP_005268434 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AALGLLQF 9 AALG L+F Sbjct: 314 AALGYLRF 321>XP_006714819 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AALGLLQF 9 AALG L+F Sbjct: 281 AALGYLRF 288>XP_005263496 Length = 2322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EAALGLLQF 9 EAA G+L++ Sbjct: 1200 EAAAGVLEY 1208>XP_005263495 Length = 2549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EAALGLLQF 9 EAA G+L++ Sbjct: 1427 EAAAGVLEY 1435Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.145 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 403,858 Number of extensions: 457 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |