Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_065681 20 390 NP_066124 20 390 XP_006717999 20 390 XP_006722091 17 2528 XP_006722090 17 2528 XP_006722089 17 2528 XP_006722088 17 2528 XP_006722087 17 2528 XP_006722086 17 2528 NP_003101 17 2528 NP_001139395 16 5631 NP_065894 16 5631 XP_005254476 16 5631 XP_005254474 16 5631 NP_001004326 16 7355 NP_001157968 16 7355 XP_005274066 16 7355 XP_006718150 16 7355 XP_006713762 16 7355 XP_006713760 16 7355 XP_006713759 16 7355 NP_060808 16 7355 NP_001138390 15 9605 NP_001138386 15 9605 NP_001138387 15 9605 NP_000132 15 9605 NP_075259 15 9605 NP_001138388 15 9605 NP_001138391 15 9605 NP_001138385 15 9605 NP_075418 15 9605 XP_006717776 15 9605 XP_006717775 15 9605 XP_006717774 15 9605 XP_006717773 15 9605 XP_006717772 15 9605 XP_006717771 15 9605 NP_001092006 15 9605 NP_003472 15 9605>NP_065681 Length = 1072 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DYLELAAST 9 DYL+LAAST Sbjct: 1014 DYLDLAAST 1022>NP_066124 Length = 1114 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DYLELAAST 9 DYL+LAAST Sbjct: 1014 DYLDLAAST 1022>XP_006717999 Length = 1207 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DYLELAAST 9 DYL+LAAST Sbjct: 1107 DYLDLAAST 1115>XP_006722091 Length = 656 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DYLELAAST 9 DYL+ AAST Sbjct: 18 DYLQPAAST 26>XP_006722090 Length = 660 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DYLELAAST 9 DYL+ AAST Sbjct: 11 DYLQPAAST 19>XP_006722089 Length = 660 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DYLELAAST 9 DYL+ AAST Sbjct: 11 DYLQPAAST 19>XP_006722088 Length = 660 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DYLELAAST 9 DYL+ AAST Sbjct: 11 DYLQPAAST 19>XP_006722087 Length = 664 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DYLELAAST 9 DYL+ AAST Sbjct: 18 DYLQPAAST 26>XP_006722086 Length = 667 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DYLELAAST 9 DYL+ AAST Sbjct: 18 DYLQPAAST 26>NP_003101 Length = 613 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DYLELAAST 9 DYL+ AAST Sbjct: 18 DYLQPAAST 26>NP_001139395 Length = 1154 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLELA Sbjct: 1128 DYLELA 1133>NP_065894 Length = 1400 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLELA Sbjct: 1374 DYLELA 1379>XP_005254476 Length = 1400 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLELA Sbjct: 1374 DYLELA 1379>XP_005254474 Length = 1406 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLELA Sbjct: 1380 DYLELA 1385>NP_001004326 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YLELAAS 8 YL+LAAS Sbjct: 173 YLQLAAS 179>NP_001157968 Length = 1854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DYLELAA 7 DY+ELA+ Sbjct: 112 DYMELAS 118>XP_005274066 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YLELAAS 8 YL+LAAS Sbjct: 173 YLQLAAS 179>XP_006718150 Length = 621 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YLELAAST 9 YLELA +T Sbjct: 600 YLELAQTT 607>XP_006713762 Length = 1197 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DYLELAA 7 DY+ELA+ Sbjct: 156 DYMELAS 162>XP_006713760 Length = 1847 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DYLELAA 7 DY+ELA+ Sbjct: 105 DYMELAS 111>XP_006713759 Length = 1898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DYLELAA 7 DY+ELA+ Sbjct: 156 DYMELAS 162>NP_060808 Length = 982 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DYLELAA 7 DY+ELA+ Sbjct: 112 DYMELAS 118>NP_001138390 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLE+A Sbjct: 259 DYLEIA 264>NP_001138386 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLE+A Sbjct: 262 DYLEIA 267>NP_001138387 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLE+A Sbjct: 285 DYLEIA 290>NP_000132 Length = 821 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLE+A Sbjct: 374 DYLEIA 379>NP_075259 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLE+A Sbjct: 375 DYLEIA 380>NP_001138388 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLE+A Sbjct: 259 DYLEIA 264>NP_001138391 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLE+A Sbjct: 286 DYLEIA 291>NP_001138385 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLE+A Sbjct: 375 DYLEIA 380>NP_075418 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLE+A Sbjct: 285 DYLEIA 290>XP_006717776 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLE+A Sbjct: 393 DYLEIA 398>XP_006717775 Length = 726 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLE+A Sbjct: 279 DYLEIA 284>XP_006717774 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLE+A Sbjct: 305 DYLEIA 310>XP_006717773 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLE+A Sbjct: 394 DYLEIA 399>XP_006717772 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLE+A Sbjct: 393 DYLEIA 398>XP_006717771 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLE+A Sbjct: 394 DYLEIA 399>NP_001092006 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLE+A Sbjct: 127 DYLEIA 132>NP_003472 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DYLELA 6 DYLE+A Sbjct: 127 DYLEIA 132Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.120 0.301 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 386,106 Number of extensions: 471 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |