Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185763 18 1482 NP_055459 18 1482 XP_006711719 18 1482 XP_006711718 18 1482 XP_006711717 18 1482 XP_006711716 18 1482 XP_006711715 18 1482 XP_006711714 18 1482 XP_006711713 18 1482 XP_006711712 18 1482 XP_006711711 18 1482 XP_006711710 18 1482 XP_006711709 18 1482 XP_005277503 18 1482 XP_005273038 18 1482 XP_006711708 18 1482 XP_005277500 18 1482 XP_006711707 18 1482 XP_005277499 18 1482 XP_006711706 18 1482 XP_006711705 18 1482 NP_569707 17 2528 XP_005271139 17 2528 XP_006710863 17 2528 XP_006710861 17 2528 XP_005271138 17 2528 XP_006710859 17 2528 NP_940892 17 3301 NP_001191814 17 3301 NP_001191813 17 3301 NP_001191815 17 3301 NP_001191812 17 3301 NP_001129628 16 7355 NP_001138600 16 7355 NP_002009 16 7355 NP_001243193 16 7355 NP_055725 16 7355 NP_001243194 16 7355 XP_005256615 16 7355 XP_005256613 16 7355 XP_005256612 16 7355 XP_006715439 16 7355 NP_060383 15 9605 NP_938020 15 9605 XP_006724542 15 9605 XP_005274533 15 9605 XP_005274532 15 9605 XP_006724541 15 9605 XP_005274531 15 9605 XP_006724540 15 9605 XP_005274530 15 9605>NP_001185763 Length = 2362 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1737 VSLAEAQQ 1744>NP_055459 Length = 2346 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1737 VSLAEAQQ 1744>XP_006711719 Length = 2302 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1693 VSLAEAQQ 1700>XP_006711718 Length = 1436 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 744 VSLAEAQQ 751>XP_006711717 Length = 2385 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1693 VSLAEAQQ 1700>XP_006711716 Length = 2411 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1802 VSLAEAQQ 1809>XP_006711715 Length = 2428 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1736 VSLAEAQQ 1743>XP_006711714 Length = 2429 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1737 VSLAEAQQ 1744>XP_006711713 Length = 2432 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1740 VSLAEAQQ 1747>XP_006711712 Length = 2473 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1900 VSLAEAQQ 1907>XP_006711711 Length = 2482 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1790 VSLAEAQQ 1797>XP_006711710 Length = 2494 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1802 VSLAEAQQ 1809>XP_006711709 Length = 2495 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1803 VSLAEAQQ 1810>XP_005277503 Length = 2498 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1900 VSLAEAQQ 1907>XP_005273038 Length = 2509 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1900 VSLAEAQQ 1907>XP_006711708 Length = 2512 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1900 VSLAEAQQ 1907>XP_005277500 Length = 2525 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1900 VSLAEAQQ 1907>XP_006711707 Length = 2553 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1900 VSLAEAQQ 1907>XP_005277499 Length = 2561 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1900 VSLAEAQQ 1907>XP_006711706 Length = 2591 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1899 VSLAEAQQ 1906>XP_006711705 Length = 2592 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAEAQQ Sbjct: 1900 VSLAEAQQ 1907>NP_569707 Length = 1898 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DVSLAEAQQ 9 DV LAEAQ+ Sbjct: 764 DVMLAEAQE 772>XP_005271139 Length = 1796 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DVSLAEAQQ 9 DV LAEAQ+ Sbjct: 662 DVMLAEAQE 670>XP_006710863 Length = 1811 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DVSLAEAQQ 9 DV LAEAQ+ Sbjct: 666 DVMLAEAQE 674>XP_006710861 Length = 1902 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DVSLAEAQQ 9 DV LAEAQ+ Sbjct: 768 DVMLAEAQE 776>XP_005271138 Length = 1909 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DVSLAEAQQ 9 DV LAEAQ+ Sbjct: 764 DVMLAEAQE 772>XP_006710859 Length = 1913 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DVSLAEAQQ 9 DV LAEAQ+ Sbjct: 768 DVMLAEAQE 776>NP_940892 Length = 212 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 DVSLAEAQ 8 +VSLAEAQ Sbjct: 140 EVSLAEAQ 147>NP_001191814 Length = 212 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 DVSLAEAQ 8 +VSLAEAQ Sbjct: 140 EVSLAEAQ 147>NP_001191813 Length = 212 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 DVSLAEAQ 8 +VSLAEAQ Sbjct: 140 EVSLAEAQ 147>NP_001191815 Length = 212 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 DVSLAEAQ 8 +VSLAEAQ Sbjct: 140 EVSLAEAQ 147>NP_001191812 Length = 212 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 DVSLAEAQ 8 +VSLAEAQ Sbjct: 140 EVSLAEAQ 147>NP_001129628 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DVSLAEAQ 8 D+SL EAQ Sbjct: 425 DLSLTEAQ 432>NP_001138600 Length = 1911 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAE+Q+ Sbjct: 1645 VSLAESQE 1652>NP_002009 Length = 1269 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 +SLAEA+Q Sbjct: 888 MSLAEAEQ 895>NP_001243193 Length = 1258 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 +SLAEA+Q Sbjct: 877 MSLAEAEQ 884>NP_055725 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DVSLAEAQ 8 D+SL EAQ Sbjct: 425 DLSLTEAQ 432>NP_001243194 Length = 1214 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 +SLAEA+Q Sbjct: 833 MSLAEAEQ 840>XP_005256615 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 +SLAEA+Q Sbjct: 887 MSLAEAEQ 894>XP_005256613 Length = 1295 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 +SLAEA+Q Sbjct: 887 MSLAEAEQ 894>XP_005256612 Length = 1296 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 +SLAEA+Q Sbjct: 888 MSLAEAEQ 895>XP_006715439 Length = 1911 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSLAEAQQ 9 VSLAE+Q+ Sbjct: 1645 VSLAESQE 1652>NP_060383 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SLAEAQQ 9 +LAEAQQ Sbjct: 70 NLAEAQQ 76>NP_938020 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DVSLAEAQ 8 D+SLAE Q Sbjct: 525 DMSLAELQ 532>XP_006724542 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DVSLAEAQ 8 D+SLAE Q Sbjct: 525 DMSLAELQ 532>XP_005274533 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DVSLAEAQ 8 D+SLAE Q Sbjct: 525 DMSLAELQ 532>XP_005274532 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DVSLAEAQ 8 D+SLAE Q Sbjct: 525 DMSLAELQ 532>XP_006724541 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DVSLAEAQ 8 D+SLAE Q Sbjct: 525 DMSLAELQ 532>XP_005274531 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DVSLAEAQ 8 D+SLAE Q Sbjct: 505 DMSLAELQ 512>XP_006724540 Length = 703 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DVSLAEAQ 8 D+SLAE Q Sbjct: 525 DMSLAELQ 532>XP_005274530 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DVSLAEAQ 8 D+SLAE Q Sbjct: 525 DMSLAELQ 532Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.109 0.246 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 293,945 Number of extensions: 437 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |