Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 19 665 XP_006716142 19 665 XP_005250088 19 665 XP_006716141 19 665 XP_005250085 19 665 XP_006716140 19 665 XP_005250084 19 665 XP_005250083 19 665 XP_005250082 19 665 NP_079106 17 3301 XP_005252173 17 3301 XP_005248430 17 3301 NP_149040 17 3301 NP_005948 17 4312 NP_055986 17 4312 NP_001257869 17 4312 XP_005255257 17 4312 XP_005255256 17 4312 XP_005255255 17 4312 XP_005255254 17 4312 XP_005255252 17 4312 XP_005263520 17 4312 XP_005263519 17 4312 XP_005263518 17 4312 XP_005263517 17 4312 XP_005263515 17 4312 NP_001191339 16 5631 NP_002994 16 5631 NP_001137473 16 5631 NP_001137471 16 5631 NP_001137470 16 5631 NP_001191337 16 5631 NP_001034662 16 5631 NP_065928 16 5631 XP_005256527 16 5631 NP_001004755 16 5631 NP_001006624 16 7355 NP_060853 16 7355 NP_001006623 16 7355 NP_998821 16 7355 XP_005263754 16 7355 NP_001274273 15 9605 NP_000114 15 9605 NP_000052 15 9605 NP_116753 15 9605 NP_116754 15 9605 NP_001229768 15 9605 NP_001265548 15 9605 NP_116755 15 9605 NP_116749 15 9605 NP_001161834 15 9605 NP_001161832 15 9605 NP_116750 15 9605 NP_001161833 15 9605 NP_116751 15 9605 NP_001161835 15 9605 NP_055337 15 9605 NP_001152863 15 9605 NP_001191354 15 9605 NP_001229769 15 9605 XP_005273163 15 9605 XP_005273162 15 9605 XP_005273161 15 9605 XP_005273160 15 9605 NP_001152862 15 9605 NP_000849 15 9605>NP_733751 Length = 4911 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 D RPVFVIR Sbjct: 4606 DGRPVFVIR 4614>XP_006716142 Length = 4927 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 D RPVFVIR Sbjct: 4622 DGRPVFVIR 4630>XP_005250088 Length = 4928 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 D RPVFVIR Sbjct: 4623 DGRPVFVIR 4631>XP_006716141 Length = 4959 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 D RPVFVIR Sbjct: 4654 DGRPVFVIR 4662>XP_005250085 Length = 4979 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 D RPVFVIR Sbjct: 4678 DGRPVFVIR 4686>XP_006716140 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 D RPVFVIR Sbjct: 4677 DGRPVFVIR 4685>XP_005250084 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 D RPVFVIR Sbjct: 4677 DGRPVFVIR 4685>XP_005250083 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 D RPVFVIR Sbjct: 4677 DGRPVFVIR 4685>XP_005250082 Length = 4983 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 D RPVFVIR Sbjct: 4678 DGRPVFVIR 4686>NP_079106 Length = 534 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRPVFVIR 9 +RPVFV R Sbjct: 170 IRPVFVSR 177>XP_005252173 Length = 341 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 DV P+FV+R Sbjct: 302 DVIPLFVLR 310>XP_005248430 Length = 486 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRPVFVIR 9 +RPVFV R Sbjct: 122 IRPVFVSR 129>NP_149040 Length = 475 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 DV P+FV+R Sbjct: 302 DVIPLFVLR 310>NP_005948 Length = 656 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVRPVF 6 DVRP+F Sbjct: 361 DVRPIF 366>NP_055986 Length = 1125 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VRPVFVI 8 VRPVF+I Sbjct: 688 VRPVFLI 694>NP_001257869 Length = 1111 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VRPVFVI 8 VRPVF+I Sbjct: 674 VRPVFLI 680>XP_005255257 Length = 774 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VRPVFVI 8 VRPVF+I Sbjct: 337 VRPVFLI 343>XP_005255256 Length = 780 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VRPVFVI 8 VRPVF+I Sbjct: 343 VRPVFLI 349>XP_005255255 Length = 951 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VRPVFVI 8 VRPVF+I Sbjct: 514 VRPVFLI 520>XP_005255254 Length = 1051 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VRPVFVI 8 VRPVF+I Sbjct: 614 VRPVFLI 620>XP_005255252 Length = 1124 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VRPVFVI 8 VRPVF+I Sbjct: 687 VRPVFLI 693>XP_005263520 Length = 574 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVRPVF 6 DVRP+F Sbjct: 279 DVRPIF 284>XP_005263519 Length = 656 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVRPVF 6 DVRP+F Sbjct: 361 DVRPIF 366>XP_005263518 Length = 656 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVRPVF 6 DVRP+F Sbjct: 361 DVRPIF 366>XP_005263517 Length = 656 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVRPVF 6 DVRP+F Sbjct: 361 DVRPIF 366>XP_005263515 Length = 697 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVRPVF 6 DVRP+F Sbjct: 402 DVRPIF 407>NP_001191339 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 D RP++V+R Sbjct: 337 DGRPLYVLR 345>NP_002994 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 D RP++V+R Sbjct: 337 DGRPLYVLR 345>NP_001137473 Length = 681 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 D RP++V+R Sbjct: 303 DGRPLYVLR 311>NP_001137471 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 D RP++V+R Sbjct: 337 DGRPLYVLR 345>NP_001137470 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 D RP++V+R Sbjct: 337 DGRPLYVLR 345>NP_001191337 Length = 719 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 D RP++V+R Sbjct: 337 DGRPLYVLR 345>NP_001034662 Length = 719 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 D RP++V+R Sbjct: 337 DGRPLYVLR 345>NP_065928 Length = 4427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 DV+P+F+ R Sbjct: 75 DVKPLFLSR 83>XP_005256527 Length = 4427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DVRPVFVIR 9 DV+P+F+ R Sbjct: 75 DVKPLFLSR 83>NP_001004755 Length = 315 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VRPVFVIR 9 V P+F++R Sbjct: 10 VEPIFILR 17>NP_001006624 Length = 257 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PVFVIR 9 PVFV+R Sbjct: 121 PVFVVR 126>NP_060853 Length = 1336 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PVFVIR 9 PVFV+R Sbjct: 121 PVFVVR 126>NP_001006623 Length = 326 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PVFVIR 9 PVFV+R Sbjct: 121 PVFVVR 126>NP_998821 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRPVFVIR 9 V+P F+IR Sbjct: 480 VQPCFIIR 487>XP_005263754 Length = 1133 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PVFVIR 9 PVFV+R Sbjct: 121 PVFVVR 126>NP_001274273 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 RPVFVI 8 RP+F+I Sbjct: 502 RPIFII 507>NP_000114 Length = 1186 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VRPVFV 7 +RP+FV Sbjct: 70 IRPIFV 75>NP_000052 Length = 659 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 RPVFVI 8 RP+F+I Sbjct: 468 RPIFII 473>NP_116753 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 DVRPVFVI 8 D +PVF++ Sbjct: 689 DNKPVFIV 696>NP_116754 Length = 1048 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 DVRPVFVI 8 D +PVF++ Sbjct: 700 DNKPVFIV 707>NP_001229768 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 DVRPVFV 7 D+RP+++ Sbjct: 114 DLRPIYI 120>NP_001265548 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 DVRPVFVI 8 D +PVF++ Sbjct: 689 DNKPVFIV 696>NP_116755 Length = 1340 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 DVRPVFVI 8 D +PVF++ Sbjct: 700 DNKPVFIV 707>NP_116749 Length = 1025 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 DVRPVFVI 8 D +PVF++ Sbjct: 668 DNKPVFIV 675>NP_001161834 Length = 1310 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 DVRPVFVI 8 D +PVF++ Sbjct: 668 DNKPVFIV 675>NP_001161832 Length = 1339 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 DVRPVFVI 8 D +PVF++ Sbjct: 668 DNKPVFIV 675>NP_116750 Length = 1347 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 DVRPVFVI 8 D +PVF++ Sbjct: 668 DNKPVFIV 675>NP_001161833 Length = 1065 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 DVRPVFVI 8 D +PVF++ Sbjct: 668 DNKPVFIV 675>NP_116751 Length = 1337 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 DVRPVFVI 8 D +PVF++ Sbjct: 668 DNKPVFIV 675>NP_001161835 Length = 1329 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 DVRPVFVI 8 D +PVF++ Sbjct: 668 DNKPVFIV 675>NP_055337 Length = 1021 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 DVRPVFVI 8 D +PVF++ Sbjct: 668 DNKPVFIV 675>NP_001152863 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 DVRPVFV 7 D+RP+++ Sbjct: 114 DLRPIYI 120>NP_001191354 Length = 1640 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VRPVFV 7 +RP+FV Sbjct: 524 IRPIFV 529>NP_001229769 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 DVRPVFV 7 D+RP+++ Sbjct: 135 DLRPIYI 141>XP_005273163 Length = 220 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 DVRPVFV 7 D+RP+++ Sbjct: 114 DLRPIYI 120>XP_005273162 Length = 220 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 DVRPVFV 7 D+RP+++ Sbjct: 114 DLRPIYI 120>XP_005273161 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 DVRPVFV 7 D+RP+++ Sbjct: 180 DLRPIYI 186>XP_005273160 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 DVRPVFV 7 D+RP+++ Sbjct: 180 DLRPIYI 186>NP_001152862 Length = 218 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 DVRPVFV 7 D+RP+++ Sbjct: 135 DLRPIYI 141>NP_000849 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 DVRPVFV 7 D+RP+++ Sbjct: 114 DLRPIYI 120Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.346 0.163 0.500 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 515,998 Number of extensions: 757 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |