Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 21 229 NP_001010909 17 3301 XP_005275464 17 3301 XP_005275463 17 3301 XP_005275181 17 3301 XP_005275180 17 3301 NP_002652 17 4312 NP_000691 17 4312 NP_002194 17 4312 NP_006740 16 5631 NP_001244109 16 5631 NP_001244110 16 5631 NP_001098677 16 5631 NP_002281 16 5631 NP_001098676 16 5631 XP_006716453 16 5631 XP_005273672 16 5631 XP_005273670 16 5631 XP_006715544 16 5631 XP_005267041 16 5631 XP_006715543 16 5631 XP_005267040 16 5631 NP_003791 16 7355 NP_001273357 16 7355 NP_001273355 16 7355 XP_006715652 16 7355 NP_001186930 15 9605 NP_077719 15 9605 NP_060087 15 9605 NP_000426 15 9605 NP_004896 15 9605 NP_001257293 15 9605 NP_036322 15 9605 NP_001257294 15 9605 NP_000683 15 9605 NP_005827 15 9605 XP_005259981 15 9605 XP_006713545 15 9605 XP_006713544 15 9605 XP_005270959 15 9605 XP_005270958 15 9605 XP_006710730 15 9605 NP_057629 15 9605>NP_004351 Length = 882 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVNTYNTAI 9 DVNTYN AI Sbjct: 292 DVNTYNAAI 300>NP_001010909 Length = 566 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NTYNTAI 9 NT+NTA+ Sbjct: 510 NTFNTAV 516>XP_005275464 Length = 572 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NTYNTAI 9 NT+NTA+ Sbjct: 516 NTFNTAV 522>XP_005275463 Length = 626 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NTYNTAI 9 NT+NTA+ Sbjct: 570 NTFNTAV 576>XP_005275181 Length = 572 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NTYNTAI 9 NT+NTA+ Sbjct: 516 NTFNTAV 522>XP_005275180 Length = 596 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NTYNTAI 9 NT+NTA+ Sbjct: 540 NTFNTAV 546>NP_002652 Length = 1265 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DVNTYN 6 D+NTYN Sbjct: 854 DLNTYN 859>NP_000691 Length = 346 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DVNTYNTAI 9 DVN +NT + Sbjct: 217 DVNVFNTIL 225>NP_002194 Length = 1181 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DVNTYNTAI 9 ++NTYN I Sbjct: 1099 EINTYNPEI 1107>NP_006740 Length = 652 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DVNTYNTAI 9 DVN YN + Sbjct: 76 DVNLYNETV 84>NP_001244109 Length = 652 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DVNTYNTAI 9 DVN YN + Sbjct: 76 DVNLYNETV 84>NP_001244110 Length = 652 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DVNTYNTAI 9 DVN YN + Sbjct: 76 DVNLYNETV 84>NP_001098677 Length = 1816 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DVNTYNTAI 9 D + YNTA+ Sbjct: 763 DSSAYNTAV 771>NP_002281 Length = 1816 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DVNTYNTAI 9 D + YNTA+ Sbjct: 763 DSSAYNTAV 771>NP_001098676 Length = 1823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DVNTYNTAI 9 D + YNTA+ Sbjct: 770 DSSAYNTAV 778>XP_006716453 Length = 605 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DVNTYNTAI 9 DVN YN + Sbjct: 76 DVNLYNETV 84>XP_005273672 Length = 612 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DVNTYNTAI 9 DVN YN + Sbjct: 76 DVNLYNETV 84>XP_005273670 Length = 652 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DVNTYNTAI 9 DVN YN + Sbjct: 76 DVNLYNETV 84>XP_006715544 Length = 1810 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DVNTYNTAI 9 D + YNTA+ Sbjct: 757 DSSAYNTAV 765>XP_005267041 Length = 1823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DVNTYNTAI 9 D + YNTA+ Sbjct: 770 DSSAYNTAV 778>XP_006715543 Length = 1823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DVNTYNTAI 9 D + YNTA+ Sbjct: 770 DSSAYNTAV 778>XP_005267040 Length = 1823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DVNTYNTAI 9 D + YNTA+ Sbjct: 770 DSSAYNTAV 778>NP_003791 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NTYNTAI 9 N YNTA+ Sbjct: 537 NAYNTAM 543>NP_001273357 Length = 514 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NTYNTAI 9 N YNTA+ Sbjct: 454 NAYNTAM 460>NP_001273355 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NTYNTAI 9 N YNTA+ Sbjct: 514 NAYNTAM 520>XP_006715652 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NTYNTAI 9 N YNTA+ Sbjct: 514 NAYNTAM 520>NP_001186930 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VNTYN 6 VNTYN Sbjct: 279 VNTYN 283>NP_077719 Length = 2471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VNTYN 6 VNTYN Sbjct: 279 VNTYN 283>NP_060087 Length = 2555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VNTYN 6 VNTYN Sbjct: 276 VNTYN 280>NP_000426 Length = 2321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VNTYN 6 VNTYN Sbjct: 255 VNTYN 259>NP_004896 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 5/6 (83%) Query: 1 DVNTYN 6 D+N YN Sbjct: 85 DINAYN 90>NP_001257293 Length = 912 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VNTYN 6 VNTYN Sbjct: 870 VNTYN 874>NP_036322 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VNTYN 6 VNTYN Sbjct: 860 VNTYN 864>NP_001257294 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VNTYN 6 VNTYN Sbjct: 759 VNTYN 763>NP_000683 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VNTYN 6 VNTYN Sbjct: 470 VNTYN 474>NP_005827 Length = 137 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 DVNTYNT 7 D+N +NT Sbjct: 85 DINDFNT 91>XP_005259981 Length = 2269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VNTYN 6 VNTYN Sbjct: 255 VNTYN 259>XP_006713545 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VNTYN 6 VNTYN Sbjct: 858 VNTYN 862>XP_006713544 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VNTYN 6 VNTYN Sbjct: 860 VNTYN 864>XP_005270959 Length = 2432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VNTYN 6 VNTYN Sbjct: 240 VNTYN 244>XP_005270958 Length = 2432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VNTYN 6 VNTYN Sbjct: 240 VNTYN 244>XP_006710730 Length = 2432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 VNTYN 6 VNTYN Sbjct: 240 VNTYN 244>NP_057629 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DVNTYNTAI 9 D+N ++TAI Sbjct: 316 DMNPWSTAI 324Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.123 0.338 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 455,938 Number of extensions: 591 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |