Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 19 665 NP_001185763 19 665 NP_055459 19 665 XP_006726436 19 665 XP_006726410 19 665 XP_006711784 19 665 XP_006711719 19 665 XP_006711718 19 665 XP_006711717 19 665 XP_006711716 19 665 XP_006711715 19 665 XP_006711714 19 665 XP_006711713 19 665 XP_006711712 19 665 XP_006711711 19 665 XP_006711710 19 665 XP_006711709 19 665 XP_005277503 19 665 XP_005273038 19 665 XP_006711708 19 665 XP_005277500 19 665 XP_006711707 19 665 XP_005277499 19 665 XP_006711706 19 665 XP_006711705 19 665 XP_006711164 19 665 XP_005276114 19 665 XP_006710122 19 665 NP_006209 17 3301 NP_001103132 17 3301 XP_006713721 17 3301 NP_060868 17 4312 XP_005265376 17 4312 XP_005265375 17 4312 NP_001002907 16 5631 NP_055105 16 7355 NP_000709 16 7355 NP_001230741 16 7355 XP_006717089 16 7355 XP_006717088 16 7355 NP_001171655 15 9605 NP_000346 15 9605 NP_775105 15 9605 NP_001036148 15 9605 NP_001008781 15 9605 XP_006715505 15 9605 XP_006715504 15 9605 XP_006715503 15 9605 XP_006715502 15 9605>NP_001185761 Length = 2240 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2217 DVLKKARTN 2225>NP_001185763 Length = 2362 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2323 DVLKKARTN 2331>NP_055459 Length = 2346 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2323 DVLKKARTN 2331>XP_006726436 Length = 178 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 101 DVLKKARTN 109>XP_006726410 Length = 2087 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2064 DVLKKARTN 2072>XP_006711784 Length = 178 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 101 DVLKKARTN 109>XP_006711719 Length = 2302 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2279 DVLKKARTN 2287>XP_006711718 Length = 1436 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 1330 DVLKKARTN 1338>XP_006711717 Length = 2385 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2279 DVLKKARTN 2287>XP_006711716 Length = 2411 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2388 DVLKKARTN 2396>XP_006711715 Length = 2428 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2322 DVLKKARTN 2330>XP_006711714 Length = 2429 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2323 DVLKKARTN 2331>XP_006711713 Length = 2432 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2326 DVLKKARTN 2334>XP_006711712 Length = 2473 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2367 DVLKKARTN 2375>XP_006711711 Length = 2482 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2376 DVLKKARTN 2384>XP_006711710 Length = 2494 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2388 DVLKKARTN 2396>XP_006711709 Length = 2495 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2389 DVLKKARTN 2397>XP_005277503 Length = 2498 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2486 DVLKKARTN 2494>XP_005273038 Length = 2509 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2486 DVLKKARTN 2494>XP_006711708 Length = 2512 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2406 DVLKKARTN 2414>XP_005277500 Length = 2525 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2486 DVLKKARTN 2494>XP_006711707 Length = 2553 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2447 DVLKKARTN 2455>XP_005277499 Length = 2561 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2486 DVLKKARTN 2494>XP_006711706 Length = 2591 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2485 DVLKKARTN 2493>XP_006711705 Length = 2592 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2486 DVLKKARTN 2494>XP_006711164 Length = 2087 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 2064 DVLKKARTN 2072>XP_005276114 Length = 134 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 71 DVLKKARTN 79>XP_006710122 Length = 126 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DVLKKA TN Sbjct: 101 DVLKKARTN 109>NP_006209 Length = 1068 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLKKAMTN 9 +LKKA+TN Sbjct: 653 LLKKALTN 660>NP_001103132 Length = 4284 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 D+++KAM N Sbjct: 559 DIMEKAMVN 567>XP_006713721 Length = 1068 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VLKKAMTN 9 +LKKA+TN Sbjct: 653 LLKKALTN 660>NP_060868 Length = 1091 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DVLKKAMTN 9 DVL+ AM N Sbjct: 569 DVLRNAMVN 577>XP_005265376 Length = 877 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DVLKKAMTN 9 DVL+ AM N Sbjct: 569 DVLRNAMVN 577>XP_005265375 Length = 1085 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DVLKKAMTN 9 DVL+ AM N Sbjct: 563 DVLRNAMVN 571>NP_001002907 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DVLKKAMTN 9 D LK+ +TN Sbjct: 305 DALKRTLTN 313>NP_055105 Length = 1098 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DV+KK+M + Sbjct: 883 DVIKKSMVD 891>NP_000709 Length = 2339 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DVLKKAMT 8 DVLK+A T Sbjct: 414 DVLKRAAT 421>NP_001230741 Length = 2237 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DVLKKAMT 8 DVLK+A T Sbjct: 414 DVLKRAAT 421>XP_006717089 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DV+KK+M + Sbjct: 438 DVIKKSMVD 446>XP_006717088 Length = 1024 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 DV+KK+M + Sbjct: 809 DVIKKSMVD 817>NP_001171655 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DVLKKA 6 DVLKKA Sbjct: 330 DVLKKA 335>NP_000346 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DVLKKA 6 DVLKKA Sbjct: 357 DVLKKA 362>NP_775105 Length = 1659 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 D++ KA+T+ Sbjct: 1546 DIISKALTD 1554>NP_001036148 Length = 1683 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 D++ KA+T+ Sbjct: 1542 DIISKALTD 1550>NP_001008781 Length = 4557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LKKAMTN 9 LKK++TN Sbjct: 635 LKKSLTN 641>XP_006715505 Length = 1673 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 D++ KA+T+ Sbjct: 1542 DIISKALTD 1550>XP_006715504 Length = 1683 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 D++ KA+T+ Sbjct: 1542 DIISKALTD 1550>XP_006715503 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 D++ KA+T+ Sbjct: 1542 DIISKALTD 1550>XP_006715502 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DVLKKAMTN 9 D++ KA+T+ Sbjct: 1542 DIISKALTD 1550Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.121 0.301 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 353,980 Number of extensions: 494 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |