Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 20 390 NP_001185763 20 390 NP_055459 20 390 NP_001002811 20 390 NP_001002812 20 390 XP_006726410 20 390 XP_006711719 20 390 XP_006711717 20 390 XP_006711716 20 390 XP_006711715 20 390 XP_006711714 20 390 XP_006711713 20 390 XP_006711712 20 390 XP_006711711 20 390 XP_006711710 20 390 XP_006711709 20 390 XP_005277503 20 390 XP_005273038 20 390 XP_006711708 20 390 XP_005277500 20 390 XP_006711707 20 390 XP_005277499 20 390 XP_006711706 20 390 XP_006711705 20 390 XP_006711164 20 390 XP_003846806 20 390 NP_001180401 15 9605 NP_001180400 15 9605 NP_001014986 15 9605 NP_004467 15 9605 NP_060921 15 9605 NP_620167 15 9605 NP_000941 15 9605 NP_001135867 15 9605 NP_001166961 15 9605 NP_085150 15 9605 NP_001255982 15 9605 NP_001166960 15 9605 XP_006718839 15 9605 XP_005269610 15 9605 XP_006717701 15 9605 XP_005269607 15 9605 XP_005269606 15 9605>NP_001185761 Length = 2240 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 591 DVLSSNEAT 599>NP_001185763 Length = 2362 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 525 DVLSSNEAT 533>NP_055459 Length = 2346 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 525 DVLSSNEAT 533>NP_001002811 Length = 1132 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 688 DVLSSNEAT 696>NP_001002812 Length = 969 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 525 DVLSSNEAT 533>XP_006726410 Length = 2087 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 600 DVLSSNEAT 608>XP_006711719 Length = 2302 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 591 DVLSSNEAT 599>XP_006711717 Length = 2385 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 591 DVLSSNEAT 599>XP_006711716 Length = 2411 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 591 DVLSSNEAT 599>XP_006711715 Length = 2428 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 525 DVLSSNEAT 533>XP_006711714 Length = 2429 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 525 DVLSSNEAT 533>XP_006711713 Length = 2432 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 528 DVLSSNEAT 536>XP_006711712 Length = 2473 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 688 DVLSSNEAT 696>XP_006711711 Length = 2482 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 688 DVLSSNEAT 696>XP_006711710 Length = 2494 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 591 DVLSSNEAT 599>XP_006711709 Length = 2495 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 591 DVLSSNEAT 599>XP_005277503 Length = 2498 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 688 DVLSSNEAT 696>XP_005273038 Length = 2509 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 688 DVLSSNEAT 696>XP_006711708 Length = 2512 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 688 DVLSSNEAT 696>XP_005277500 Length = 2525 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 688 DVLSSNEAT 696>XP_006711707 Length = 2553 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 688 DVLSSNEAT 696>XP_005277499 Length = 2561 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 688 DVLSSNEAT 696>XP_006711706 Length = 2591 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 688 DVLSSNEAT 696>XP_006711705 Length = 2592 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 688 DVLSSNEAT 696>XP_006711164 Length = 2087 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 600 DVLSSNEAT 608>XP_003846806 Length = 136 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DVISSNEAT 9 DV+SSNEAT Sbjct: 54 DVLSSNEAT 62>NP_001180401 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSNEAT 9 SSNEAT Sbjct: 30 SSNEAT 35>NP_001180400 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSNEAT 9 SSNEAT Sbjct: 30 SSNEAT 35>NP_001014986 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSNEAT 9 SSNEAT Sbjct: 45 SSNEAT 50>NP_004467 Length = 750 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSNEAT 9 SSNEAT Sbjct: 45 SSNEAT 50>NP_060921 Length = 1338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DVISSNEAT 9 DV+ NE+T Sbjct: 810 DVVLGNEST 818>NP_620167 Length = 177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DVISSNEAT 9 D++ S EAT Sbjct: 128 DILHSEEAT 136>NP_000941 Length = 218 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DVISSNEAT 9 D+++SN A+ Sbjct: 198 DIVNSNSAS 206>NP_001135867 Length = 218 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DVISSNEAT 9 D+++SN A+ Sbjct: 198 DIVNSNSAS 206>NP_001166961 Length = 218 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DVISSNEAT 9 D+++SN A+ Sbjct: 198 DIVNSNSAS 206>NP_085150 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSNEAT 9 SSNEAT Sbjct: 497 SSNEAT 502>NP_001255982 Length = 177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DVISSNEAT 9 D++ S EAT Sbjct: 128 DILHSEEAT 136>NP_001166960 Length = 218 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DVISSNEAT 9 D+++SN A+ Sbjct: 198 DIVNSNSAS 206>XP_006718839 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSNEAT 9 SSNEAT Sbjct: 28 SSNEAT 33>XP_005269610 Length = 143 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DVISSNEAT 9 D++ S EAT Sbjct: 94 DILHSEEAT 102>XP_006717701 Length = 184 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DVISSNEAT 9 D++ S EAT Sbjct: 128 DILHSEEAT 136>XP_005269607 Length = 184 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DVISSNEAT 9 D++ S EAT Sbjct: 128 DILHSEEAT 136>XP_005269606 Length = 184 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DVISSNEAT 9 D++ S EAT Sbjct: 128 DILHSEEAT 136Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.288 0.106 0.242 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 360,679 Number of extensions: 566 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |