Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 19 869 XP_005266703 19 869 NP_001005207 17 4312 NP_056109 17 4312 XP_005257447 17 4312 XP_005257446 17 4312 XP_005257445 17 4312 XP_005257444 17 4312 XP_005257443 17 4312 XP_005257442 17 4312 XP_005273894 17 4312 NP_878253 17 4312 NP_001171835 16 5631 NP_116264 16 5631 XP_005257804 16 5631 XP_005257803 16 5631 NP_064446 16 5631 NP_064425 15 9605 NP_001001290 15 9605 NP_004298 15 9605 NP_775098 15 9605 NP_001159522 15 9605 NP_037528 15 9605 NP_001269970 15 9605 NP_001269971 15 9605 NP_001164562 15 9605 NP_079517 15 9605 NP_060538 15 9605 NP_001129193 15 9605 NP_001265246 15 9605 NP_036436 15 9605 NP_848620 15 9605 XP_005261006 15 9605 XP_006724055 15 9605 XP_005273608 15 9605 XP_005273607 15 9605 XP_005248330 15 9605 XP_005248158 15 9605 XP_006714075 15 9605 XP_006714074 15 9605 XP_006714073 15 9605 XP_006714072 15 9605 XP_006714071 15 9605 XP_006714070 15 9605 XP_006714069 15 9605 XP_006714068 15 9605 XP_006714032 15 9605 XP_006714031 15 9605>NP_443179 Length = 2170 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVGIETLAK 9 DVGI TLAK Sbjct: 2090 DVGIATLAK 2098>XP_005266703 Length = 1501 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DVGIETLAK 9 DVGI TLAK Sbjct: 1421 DVGIATLAK 1429>NP_001005207 Length = 964 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DVGIETLAK 9 D+G+E LAK Sbjct: 734 DLGMELLAK 742>NP_056109 Length = 964 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DVGIETLAK 9 D+G+E LAK Sbjct: 734 DLGMELLAK 742>XP_005257447 Length = 925 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DVGIETLAK 9 D+G+E LAK Sbjct: 734 DLGMELLAK 742>XP_005257446 Length = 925 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DVGIETLAK 9 D+G+E LAK Sbjct: 734 DLGMELLAK 742>XP_005257445 Length = 930 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DVGIETLAK 9 D+G+E LAK Sbjct: 734 DLGMELLAK 742>XP_005257444 Length = 930 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DVGIETLAK 9 D+G+E LAK Sbjct: 700 DLGMELLAK 708>XP_005257443 Length = 939 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DVGIETLAK 9 D+G+E LAK Sbjct: 700 DLGMELLAK 708>XP_005257442 Length = 973 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DVGIETLAK 9 D+G+E LAK Sbjct: 734 DLGMELLAK 742>XP_005273894 Length = 520 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VGIETLAK 9 V IETLAK Sbjct: 388 VSIETLAK 395>NP_878253 Length = 520 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VGIETLAK 9 V IETLAK Sbjct: 388 VSIETLAK 395>NP_001171835 Length = 404 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DVGIETLAK 9 DVG TLA+ Sbjct: 256 DVGFTTLAR 264>NP_116264 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DVGIETLAK 9 DVG TLA+ Sbjct: 288 DVGFTTLAR 296>XP_005257804 Length = 406 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DVGIETLAK 9 DVG TLA+ Sbjct: 258 DVGFTTLAR 266>XP_005257803 Length = 438 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DVGIETLAK 9 DVG TLA+ Sbjct: 290 DVGFTTLAR 298>NP_064446 Length = 387 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DVGIETL 7 DVG++TL Sbjct: 247 DVGVDTL 253>NP_064425 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GIETLA 8 GIETLA Sbjct: 362 GIETLA 367>NP_001001290 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GIETLA 8 GIETLA Sbjct: 333 GIETLA 338>NP_004298 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DVGIETLA 8 D G++TLA Sbjct: 8 DSGVDTLA 15>NP_775098 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DVGIETLA 8 D G++TLA Sbjct: 8 DSGVDTLA 15>NP_001159522 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DVGIETLA 8 D G++TLA Sbjct: 8 DSGVDTLA 15>NP_037528 Length = 1055 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VGIETL 7 VGIETL Sbjct: 676 VGIETL 681>NP_001269970 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VGIETL 7 VGIETL Sbjct: 676 VGIETL 681>NP_001269971 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VGIETL 7 VGIETL Sbjct: 676 VGIETL 681>NP_001164562 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VGIETLAK 9 +G++T+AK Sbjct: 120 LGVDTIAK 127>NP_079517 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VGIETLAK 9 +G++T+AK Sbjct: 173 LGVDTIAK 180>NP_060538 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VGIETLAK 9 +GIET++K Sbjct: 78 LGIETVSK 85>NP_001129193 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VGIETLAK 9 +GIET++K Sbjct: 78 LGIETVSK 85>NP_001265246 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DVGIETLAK 9 D G+E LAK Sbjct: 344 DHGVEYLAK 352>NP_036436 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DVGIETLAK 9 D G+E LAK Sbjct: 391 DHGVEYLAK 399>NP_848620 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGIETLAK 9 VG+ T+AK Sbjct: 313 VGLSTMAK 320>XP_005261006 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VGIETL 7 VGIETL Sbjct: 272 VGIETL 277>XP_006724055 Length = 826 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VGIETL 7 VGIETL Sbjct: 377 VGIETL 382>XP_005273608 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VGIETLAK 9 +GIET++K Sbjct: 78 LGIETVSK 85>XP_005273607 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VGIETLAK 9 +GIET++K Sbjct: 78 LGIETVSK 85>XP_005248330 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DVGIETLAK 9 D G+E LAK Sbjct: 386 DHGVEYLAK 394>XP_005248158 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DVGIETLA 8 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714075 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DVGIETLA 8 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714074 Length = 740 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DVGIETLA 8 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714073 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DVGIETLA 8 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714072 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DVGIETLA 8 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714071 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DVGIETLA 8 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714070 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DVGIETLA 8 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714069 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DVGIETLA 8 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714068 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DVGIETLA 8 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714032 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GIETLA 8 GIETLA Sbjct: 333 GIETLA 338>XP_006714031 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GIETLA 8 GIETLA Sbjct: 362 GIETLA 367Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.135 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 380,454 Number of extensions: 498 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |