Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 869 NP_671714 19 869 XP_006715890 19 869 XP_005250160 19 869 XP_005250159 19 869 NP_001191439 17 2528 NP_055426 17 2528 XP_005248757 17 2528 XP_006715468 17 2528 XP_005248756 17 2528 XP_006715467 17 2528 NP_055733 17 3301 NP_001136357 16 5631 NP_055363 16 5631 NP_612440 16 5631 NP_001185773 16 7355 NP_001265230 16 7355 NP_001073917 16 7355 XP_005268810 16 7355 XP_005268809 16 7355 XP_006713655 16 7355 NP_036416 16 7355 NP_001140174 15 9605 NP_004178 15 9605 NP_001269551 15 9605 NP_001273063 15 9605 NP_068751 15 9605 NP_002499 15 9605 XP_006724672 15 9605 XP_005262092 15 9605 XP_006718333 15 9605 XP_005253109 15 9605 XP_006711834 15 9605>NP_005742 Length = 3907 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DTTELMGKL 9 DTTELM KL Sbjct: 937 DTTELMEKL 945>NP_671714 Length = 3899 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DTTELMGKL 9 DTTELM KL Sbjct: 937 DTTELMEKL 945>XP_006715890 Length = 3860 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DTTELMGKL 9 DTTELM KL Sbjct: 937 DTTELMEKL 945>XP_005250160 Length = 3939 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DTTELMGKL 9 DTTELM KL Sbjct: 937 DTTELMEKL 945>XP_005250159 Length = 3952 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DTTELMGKL 9 DTTELM KL Sbjct: 937 DTTELMEKL 945>NP_001191439 Length = 347 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TTELMGKL 9 TT+L+GKL Sbjct: 328 TTDLLGKL 335>NP_055426 Length = 5596 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DTTELMG 7 DTTEL+G Sbjct: 2097 DTTELLG 2103>XP_005248757 Length = 3591 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DTTELMG 7 DTTEL+G Sbjct: 92 DTTELLG 98>XP_006715468 Length = 3744 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DTTELMG 7 DTTEL+G Sbjct: 245 DTTELLG 251>XP_005248756 Length = 3905 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DTTELMG 7 DTTEL+G Sbjct: 406 DTTELLG 412>XP_006715467 Length = 5550 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DTTELMG 7 DTTEL+G Sbjct: 2097 DTTELLG 2103>NP_055733 Length = 802 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TTELMGKL 9 TTE MGKL Sbjct: 203 TTEEMGKL 210>NP_001136357 Length = 315 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTTELMGKL 9 D EL+GKL Sbjct: 16 DEDELLGKL 24>NP_055363 Length = 351 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTTELMGKL 9 D EL+GKL Sbjct: 16 DEDELLGKL 24>NP_612440 Length = 412 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTELMGKL 9 T EL+GKL Sbjct: 364 TLELLGKL 371>NP_001185773 Length = 173 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DTTELMGKL 9 D TE GK+ Sbjct: 132 DNTEFQGKI 140>NP_001265230 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DTTELMGKL 9 DTT ++G+L Sbjct: 133 DTTTVLGEL 141>NP_001073917 Length = 1130 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DTTELMGKL 9 DTT ++G+L Sbjct: 133 DTTTVLGEL 141>XP_005268810 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTTELMGKL 9 DTTEL+ L Sbjct: 475 DTTELLQSL 483>XP_005268809 Length = 1023 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTTELMGKL 9 DTTEL+ L Sbjct: 493 DTTELLQSL 501>XP_006713655 Length = 1146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DTTELMGKL 9 DTT ++G+L Sbjct: 133 DTTTVLGEL 141>NP_036416 Length = 1083 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTTELMGKL 9 DTTEL+ L Sbjct: 553 DTTELLQSL 561>NP_001140174 Length = 1379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DTTELMGKL 9 D T L+G+L Sbjct: 1233 DVTALLGRL 1241>NP_004178 Length = 1560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DTTELMGKL 9 D T L+G+L Sbjct: 1300 DVTALLGRL 1308>NP_001269551 Length = 1559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DTTELMGKL 9 D T L+G+L Sbjct: 1299 DVTALLGRL 1307>NP_001273063 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DTTELMG 7 D+TE MG Sbjct: 298 DSTEFMG 304>NP_068751 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DTTELMG 7 D+TE MG Sbjct: 298 DSTEFMG 304>NP_002499 Length = 1247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DTTELMGKL 9 DTT+ +GK+ Sbjct: 112 DTTDGLGKV 120>XP_006724672 Length = 1446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DTTELMGKL 9 D T L+G+L Sbjct: 1300 DVTALLGRL 1308>XP_005262092 Length = 1557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DTTELMGKL 9 D T L+G+L Sbjct: 1300 DVTALLGRL 1308>XP_006718333 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DTTELMG 7 D+TE MG Sbjct: 188 DSTEFMG 194>XP_005253109 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DTTELMG 7 D+TE MG Sbjct: 302 DSTEFMG 308>XP_006711834 Length = 1156 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DTTELMGKL 9 DTT+ +GK+ Sbjct: 112 DTTDGLGKV 120Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.130 0.339 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 463,545 Number of extensions: 782 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |