Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 19 869 NP_005913 19 869 XP_005267046 19 869 XP_005267045 19 869 NP_006819 17 4312 XP_006715385 17 4312 NP_004577 16 5631 XP_005274634 16 5631 XP_006724570 16 5631 XP_005274633 16 5631 XP_005274632 16 5631 XP_006724569 16 5631 XP_005274630 16 5631 XP_006724568 16 5631 XP_005259877 16 5631 NP_055790 16 5631 NP_060871 16 7355 NP_001274669 16 7355 NP_002378 16 7355 NP_001078846 16 7355 NP_659438 16 7355 XP_005272048 16 7355 XP_006714680 16 7355 NP_001106195 16 7355 NP_001158152 15 9605 NP_847898 15 9605 NP_001828 15 9605 NP_847899 15 9605 NP_878314 15 9605 NP_006101 15 9605 NP_001263380 15 9605 NP_001230575 15 9605 XP_006713023 15 9605>NP_006715 Length = 1558 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DTRELMAMK 9 DT ELMAMK Sbjct: 1314 DTGELMAMK 1322>NP_005913 Length = 1608 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DTRELMAMK 9 DT ELMAMK Sbjct: 1364 DTGELMAMK 1372>XP_005267046 Length = 1554 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DTRELMAMK 9 DT ELMAMK Sbjct: 1310 DTGELMAMK 1318>XP_005267045 Length = 1604 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DTRELMAMK 9 DT ELMAMK Sbjct: 1360 DTGELMAMK 1368>NP_006819 Length = 2202 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTRELMAMK 9 D REL+A+K Sbjct: 2123 DKRELIALK 2131>XP_006715385 Length = 1866 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTRELMAMK 9 D REL+A+K Sbjct: 1787 DKRELIALK 1795>NP_004577 Length = 740 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTRELMAMK 9 D R+L AMK Sbjct: 92 DARQLYAMK 100>XP_005274634 Length = 710 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTRELMAMK 9 D R+L AMK Sbjct: 63 DARQLYAMK 71>XP_006724570 Length = 711 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTRELMAMK 9 D R+L AMK Sbjct: 64 DARQLYAMK 72>XP_005274633 Length = 711 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTRELMAMK 9 D R+L AMK Sbjct: 63 DARQLYAMK 71>XP_005274632 Length = 712 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTRELMAMK 9 D R+L AMK Sbjct: 64 DARQLYAMK 72>XP_006724569 Length = 712 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTRELMAMK 9 D R+L AMK Sbjct: 64 DARQLYAMK 72>XP_005274630 Length = 739 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTRELMAMK 9 D R+L AMK Sbjct: 92 DARQLYAMK 100>XP_006724568 Length = 740 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTRELMAMK 9 D R+L AMK Sbjct: 92 DARQLYAMK 100>XP_005259877 Length = 1394 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTRELMAMK 9 DTR+ AMK Sbjct: 219 DTRQRFAMK 227>NP_055790 Length = 1570 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTRELMAMK 9 DTR+ AMK Sbjct: 395 DTRQRFAMK 403>NP_060871 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DTRELMAMK 9 DT+++ AMK Sbjct: 44 DTKKMYAMK 52>NP_001274669 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DTRELMAMK 9 DT+++ AMK Sbjct: 44 DTKKMYAMK 52>NP_002378 Length = 829 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RELMAMK 9 +ELMAMK Sbjct: 620 QELMAMK 626>NP_001078846 Length = 1019 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RELMAMK 9 +ELMAMK Sbjct: 810 QELMAMK 816>NP_659438 Length = 166 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DTRELMAMK 9 DT+++ AMK Sbjct: 44 DTKKMYAMK 52>XP_005272048 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RELMAMK 9 +ELMAMK Sbjct: 620 QELMAMK 626>XP_006714680 Length = 1002 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RELMAMK 9 +ELMAMK Sbjct: 771 QELMAMK 777>NP_001106195 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DTRELMAMK 9 DT+++ AMK Sbjct: 44 DTKKMYAMK 52>NP_001158152 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DTRELMA 7 DTR LMA Sbjct: 46 DTRALMA 52>NP_847898 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DTRELMA 7 DTR LMA Sbjct: 49 DTRALMA 55>NP_001828 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DTRELMA 7 DTR LMA Sbjct: 28 DTRALMA 34>NP_847899 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DTRELMA 7 DTR LMA Sbjct: 28 DTRALMA 34>NP_878314 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RELMAMK 9 RE++AMK Sbjct: 178 REMLAMK 184>NP_006101 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DTRELMAMK 9 +TRE +AM+ Sbjct: 220 ETRERLAMR 228>NP_001263380 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TRELMAMK 9 TRE +AMK Sbjct: 62 TREELAMK 69>NP_001230575 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DTRELMAMK 9 +TRE +AM+ Sbjct: 220 ETRERLAMR 228>XP_006713023 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DTRELMA 7 DTR LMA Sbjct: 28 DTRALMA 34Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.124 0.310 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 346,234 Number of extensions: 381 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |