Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 19 665 XP_006716142 19 665 XP_005250088 19 665 XP_006716141 19 665 XP_005250085 19 665 XP_006716140 19 665 XP_005250084 19 665 XP_005250083 19 665 XP_005250082 19 665 NP_001092880 16 5631 NP_001092881 16 5631 NP_055525 16 5631 NP_000258 16 5631 NP_001035957 16 5631 NP_001171656 16 5631 NP_001005207 16 5631 NP_001171511 16 5631 NP_004168 16 5631 NP_056109 16 5631 XP_006721991 16 5631 XP_006721990 16 5631 XP_006721989 16 5631 XP_005258041 16 5631 XP_006721988 16 5631 XP_006721987 16 5631 XP_006721986 16 5631 XP_005258040 16 5631 XP_006721985 16 5631 XP_005257447 16 5631 XP_005257446 16 5631 XP_005257445 16 5631 XP_005257444 16 5631 XP_005257443 16 5631 XP_005257442 16 5631 XP_005274257 16 5631 XP_005274256 16 5631 XP_005274255 16 5631 XP_005274253 16 5631 XP_005274252 16 5631 XP_006718735 16 5631 NP_644810 15 9605 NP_001005163 15 9605>NP_733751 Length = 4911 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DTDS+LIAV Sbjct: 597 DTDSLLIAV 605>XP_006716142 Length = 4927 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DTDS+LIAV Sbjct: 598 DTDSLLIAV 606>XP_005250088 Length = 4928 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DTDS+LIAV Sbjct: 598 DTDSLLIAV 606>XP_006716141 Length = 4959 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DTDS+LIAV Sbjct: 598 DTDSLLIAV 606>XP_005250085 Length = 4979 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DTDS+LIAV Sbjct: 598 DTDSLLIAV 606>XP_006716140 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DTDS+LIAV Sbjct: 598 DTDSLLIAV 606>XP_005250084 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DTDS+LIAV Sbjct: 598 DTDSLLIAV 606>XP_005250083 Length = 4982 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DTDS+LIAV Sbjct: 597 DTDSLLIAV 605>XP_005250082 Length = 4983 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DTDS+LIAV Sbjct: 598 DTDSLLIAV 606>NP_001092880 Length = 1395 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TDSVLIA 8 TDSVL+A Sbjct: 124 TDSVLVA 130>NP_001092881 Length = 1395 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TDSVLIA 8 TDSVL+A Sbjct: 124 TDSVLVA 130>NP_055525 Length = 1395 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TDSVLIA 8 TDSVL+A Sbjct: 124 TDSVLVA 130>NP_000258 Length = 2818 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DT++VL+A+ Sbjct: 699 DTEAVLVAM 707>NP_001035957 Length = 2839 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DT++VL+A+ Sbjct: 699 DTEAVLVAM 707>NP_001171656 Length = 1395 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TDSVLIA 8 TDSVL+A Sbjct: 124 TDSVLVA 130>NP_001005207 Length = 964 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 D+D+V++AV Sbjct: 834 DSDAVVVAV 842>NP_001171511 Length = 277 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDSVLIAV 9 DTD+V IA+ Sbjct: 18 DTDAVEIAI 26>NP_004168 Length = 289 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDSVLIAV 9 DTD+V IA+ Sbjct: 18 DTDAVEIAI 26>NP_056109 Length = 964 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 D+D+V++AV Sbjct: 834 DSDAVVVAV 842>XP_006721991 Length = 1632 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DT++VL+A+ Sbjct: 709 DTEAVLVAM 717>XP_006721990 Length = 2823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DT++VL+A+ Sbjct: 709 DTEAVLVAM 717>XP_006721989 Length = 2823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DT++VL+A+ Sbjct: 709 DTEAVLVAM 717>XP_005258041 Length = 2836 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DT++VL+A+ Sbjct: 699 DTEAVLVAM 707>XP_006721988 Length = 2846 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DT++VL+A+ Sbjct: 709 DTEAVLVAM 717>XP_006721987 Length = 2849 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DT++VL+A+ Sbjct: 709 DTEAVLVAM 717>XP_006721986 Length = 2854 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DT++VL+A+ Sbjct: 696 DTEAVLVAM 704>XP_005258040 Length = 2857 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DT++VL+A+ Sbjct: 699 DTEAVLVAM 707>XP_006721985 Length = 2867 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 DT++VL+A+ Sbjct: 709 DTEAVLVAM 717>XP_005257447 Length = 925 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 D+D+V++AV Sbjct: 834 DSDAVVVAV 842>XP_005257446 Length = 925 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 D+D+V++AV Sbjct: 834 DSDAVVVAV 842>XP_005257445 Length = 930 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 D+D+V++AV Sbjct: 791 DSDAVVVAV 799>XP_005257444 Length = 930 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 D+D+V++AV Sbjct: 800 DSDAVVVAV 808>XP_005257443 Length = 939 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 D+D+V++AV Sbjct: 800 DSDAVVVAV 808>XP_005257442 Length = 973 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DTDSVLIAV 9 D+D+V++AV Sbjct: 834 DSDAVVVAV 842>XP_005274257 Length = 252 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDSVLIAV 9 DTD+V IA+ Sbjct: 18 DTDAVEIAI 26>XP_005274256 Length = 265 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDSVLIAV 9 DTD+V IA+ Sbjct: 18 DTDAVEIAI 26>XP_005274255 Length = 287 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDSVLIAV 9 DTD+V IA+ Sbjct: 18 DTDAVEIAI 26>XP_005274253 Length = 289 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDSVLIAV 9 DTD+V IA+ Sbjct: 18 DTDAVEIAI 26>XP_005274252 Length = 289 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDSVLIAV 9 DTD+V IA+ Sbjct: 18 DTDAVEIAI 26>XP_006718735 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDSVLIAV 9 DTD+V IA+ Sbjct: 18 DTDAVEIAI 26>NP_644810 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DTDSVLI 7 DTD +LI Sbjct: 179 DTDGILI 185>NP_001005163 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DSVLIAV 9 DS+LIA+ Sbjct: 213 DSILIAI 219Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.133 0.325 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 465,643 Number of extensions: 642 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |