Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 18 1135 XP_006715292 18 1135 NP_001245215 17 2528 NP_001269358 17 2528 NP_001245216 17 2528 NP_775785 17 2528 XP_006714605 17 2528 XP_006714604 17 2528 XP_006714603 17 2528 XP_006714602 17 2528 XP_006714601 17 2528 XP_006714600 17 2528 NP_055873 16 5631 NP_006381 16 5631 NP_003588 16 5631 NP_001171187 16 5631 NP_001171189 16 5631 NP_786951 16 5631 XP_006719854 16 5631 XP_006719853 16 5631 XP_005246236 16 5631 NP_001177924 16 5631 NP_000154 16 7355 NP_001229329 16 7355 NP_001229335 16 7355 NP_001229332 16 7355 NP_001229333 16 7355 NP_001229330 16 7355 NP_001229331 16 7355 NP_001229389 16 7355 NP_001229334 16 7355 NP_001229328 16 7355 NP_006382 16 7355 NP_001136105 16 7355 NP_055123 16 7355 XP_005256637 16 7355 XP_005256636 16 7355 XP_005248345 16 7355 NP_002592 15 9605 NP_689771 15 9605 NP_001274431 15 9605 NP_001274430 15 9605 NP_001274429 15 9605 NP_001274428 15 9605 NP_599025 15 9605 NP_006853 15 9605 NP_001077434 15 9605 NP_001077433 15 9605 NP_001077432 15 9605 NP_001268662 15 9605 NP_075062 15 9605 NP_065811 15 9605 NP_001264 15 9605 NP_001268661 15 9605 XP_006719025 15 9605 XP_005253725 15 9605 XP_006719024 15 9605 XP_006719023 15 9605 XP_006719022 15 9605 XP_006719021 15 9605 XP_006715740 15 9605 XP_006715739 15 9605 XP_006712712 15 9605 XP_006712711 15 9605 XP_006712710 15 9605 XP_006712709 15 9605 XP_005244913 15 9605 XP_005244911 15 9605 XP_005244910 15 9605 NP_602298 15 9605>NP_115927 Length = 1321 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TDALLSTS 9 TDALLSTS Sbjct: 315 TDALLSTS 322>XP_006715292 Length = 759 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TDALLSTS 9 TDALLSTS Sbjct: 302 TDALLSTS 309>NP_001245215 Length = 498 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDALLSTS 9 DTD +LST+ Sbjct: 177 DTDTILSTN 185>NP_001269358 Length = 437 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDALLSTS 9 DTD +LST+ Sbjct: 116 DTDTILSTN 124>NP_001245216 Length = 498 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDALLSTS 9 DTD +LST+ Sbjct: 213 DTDTILSTN 221>NP_775785 Length = 561 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDALLSTS 9 DTD +LST+ Sbjct: 240 DTDTILSTN 248>XP_006714605 Length = 496 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDALLSTS 9 DTD +LST+ Sbjct: 240 DTDTILSTN 248>XP_006714604 Length = 531 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDALLSTS 9 DTD +LST+ Sbjct: 240 DTDTILSTN 248>XP_006714603 Length = 561 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDALLSTS 9 DTD +LST+ Sbjct: 240 DTDTILSTN 248>XP_006714602 Length = 561 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDALLSTS 9 DTD +LST+ Sbjct: 240 DTDTILSTN 248>XP_006714601 Length = 561 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDALLSTS 9 DTD +LST+ Sbjct: 240 DTDTILSTN 248>XP_006714600 Length = 561 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDALLSTS 9 DTD +LST+ Sbjct: 240 DTDTILSTN 248>NP_055873 Length = 1905 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DTDALLS 7 DTDALL+ Sbjct: 1486 DTDALLA 1492>NP_006381 Length = 1037 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 DTD LLS + Sbjct: 704 DTDTLLSNA 712>NP_003588 Length = 512 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TDALLSTS 9 TD+LLST+ Sbjct: 220 TDSLLSTN 227>NP_001171187 Length = 495 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TDALLSTS 9 TD+LLST+ Sbjct: 203 TDSLLSTN 210>NP_001171189 Length = 495 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TDALLSTS 9 TD+LLST+ Sbjct: 203 TDSLLSTN 210>NP_786951 Length = 214 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDALLSTS 9 + DALLST+ Sbjct: 197 EADALLSTT 205>XP_006719854 Length = 1550 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DTDALLS 7 DTDALL+ Sbjct: 1131 DTDALLA 1137>XP_006719853 Length = 1809 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DTDALLS 7 DTDALL+ Sbjct: 1390 DTDALLA 1396>XP_005246236 Length = 495 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TDALLSTS 9 TD+LLST+ Sbjct: 203 TDSLLSTN 210>NP_001177924 Length = 832 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 DTD LLS + Sbjct: 499 DTDTLLSNA 507>NP_000154 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 DTD LLS+ Sbjct: 361 DTDRLLSS 368>NP_001229329 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 DTD LLS+ Sbjct: 361 DTDRLLSS 368>NP_001229335 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 DTD LLS+ Sbjct: 361 DTDRLLSS 368>NP_001229332 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 DTD LLS+ Sbjct: 361 DTDRLLSS 368>NP_001229333 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 DTD LLS+ Sbjct: 361 DTDRLLSS 368>NP_001229330 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 DTD LLS+ Sbjct: 361 DTDRLLSS 368>NP_001229331 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 DTD LLS+ Sbjct: 361 DTDRLLSS 368>NP_001229389 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 DTD LLS+ Sbjct: 339 DTDRLLSS 346>NP_001229334 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 DTD LLS+ Sbjct: 361 DTDRLLSS 368>NP_001229328 Length = 645 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 DTD LLS+ Sbjct: 368 DTDRLLSS 375>NP_006382 Length = 1038 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DTDALLS 7 DTD LLS Sbjct: 704 DTDTLLS 710>NP_001136105 Length = 880 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDALLSTS 9 + D+LLSTS Sbjct: 342 ERDSLLSTS 350>NP_055123 Length = 880 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDALLSTS 9 + D+LLSTS Sbjct: 342 ERDSLLSTS 350>XP_005256637 Length = 879 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDALLSTS 9 + D+LLSTS Sbjct: 342 ERDSLLSTS 350>XP_005256636 Length = 880 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DTDALLSTS 9 + D+LLSTS Sbjct: 342 ERDSLLSTS 350>XP_005248345 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 DTD LLS+ Sbjct: 339 DTDRLLSS 346>NP_002592 Length = 150 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 D D L+STS Sbjct: 135 DDDLLVSTS 143>NP_689771 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 D D +LSTS Sbjct: 314 DLDRVLSTS 322>NP_001274431 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 D D +LSTS Sbjct: 249 DLDRVLSTS 257>NP_001274430 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 D D +LSTS Sbjct: 249 DLDRVLSTS 257>NP_001274429 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 D D +LSTS Sbjct: 298 DLDRVLSTS 306>NP_001274428 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 D D +LSTS Sbjct: 314 DLDRVLSTS 322>NP_599025 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 DT ALLS + Sbjct: 11 DTQALLSAT 19>NP_006853 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 +TDA LST Sbjct: 515 ETDASLST 522>NP_001077434 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 +TDA LST Sbjct: 515 ETDASLST 522>NP_001077433 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 +TDA LST Sbjct: 470 ETDASLST 477>NP_001077432 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 +TDA LST Sbjct: 515 ETDASLST 522>NP_001268662 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 DT ALLS + Sbjct: 11 DTQALLSAT 19>NP_075062 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 DT ALLS + Sbjct: 11 DTQALLSAT 19>NP_065811 Length = 1572 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 DT+ L STS Sbjct: 395 DTEELTSTS 403>NP_001264 Length = 1912 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 D DALL+ S Sbjct: 19 DMDALLNNS 27>NP_001268661 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 DT ALLS + Sbjct: 11 DTQALLSAT 19>XP_006719025 Length = 1902 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 D DALL+ S Sbjct: 19 DMDALLNNS 27>XP_005253725 Length = 1905 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 D DALL+ S Sbjct: 19 DMDALLNNS 27>XP_006719024 Length = 1908 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 D DALL+ S Sbjct: 19 DMDALLNNS 27>XP_006719023 Length = 1914 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 D DALL+ S Sbjct: 19 DMDALLNNS 27>XP_006719022 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 D DALL+ S Sbjct: 19 DMDALLNNS 27>XP_006719021 Length = 1940 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 D DALL+ S Sbjct: 19 DMDALLNNS 27>XP_006715740 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 D D +LSTS Sbjct: 169 DLDRVLSTS 177>XP_006715739 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 D D +LSTS Sbjct: 249 DLDRVLSTS 257>XP_006712712 Length = 1414 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 DT+ L STS Sbjct: 237 DTEELTSTS 245>XP_006712711 Length = 1448 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 DT+ L STS Sbjct: 271 DTEELTSTS 279>XP_006712710 Length = 1528 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 DT+ L STS Sbjct: 402 DTEELTSTS 410>XP_006712709 Length = 1579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 DT+ L STS Sbjct: 402 DTEELTSTS 410>XP_005244913 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 +TDA LST Sbjct: 291 ETDASLST 298>XP_005244911 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 +TDA LST Sbjct: 515 ETDASLST 522>XP_005244910 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DTDALLST 8 +TDA LST Sbjct: 515 ETDASLST 522>NP_602298 Length = 740 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DTDALLSTS 9 DT ALLS + Sbjct: 11 DTQALLSAT 19Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.112 0.266 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 427,584 Number of extensions: 676 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |