Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1482 XP_006716142 18 1482 XP_005250088 18 1482 XP_006716141 18 1482 XP_005250085 18 1482 XP_006716140 18 1482 XP_005250084 18 1482 XP_005250083 18 1482 XP_005250082 18 1482 NP_006177 18 1935 XP_005246680 18 1935 XP_005246679 18 1935 XP_006712616 18 1935 XP_005246678 18 1935 NP_036223 16 5631 NP_002079 16 5631 XP_006723233 16 5631 XP_006723232 16 5631 XP_005258879 16 5631 XP_005258878 16 5631 NP_115627 16 7355 NP_612410 16 7355 XP_006718583 16 7355 XP_006718582 16 7355 NP_003473 15 9605 NP_057095 15 9605 NP_001019903 15 9605 NP_004609 15 9605 XP_005256834 15 9605 XP_005256833 15 9605 XP_006719679 15 9605 XP_005269219 15 9605 XP_006719678 15 9605 XP_006719677 15 9605 XP_005245943 15 9605 XP_006710737 15 9605 XP_005245946 15 9605 XP_005245945 15 9605 XP_005245944 15 9605 XP_005245942 15 9605>NP_733751 Length = 4911 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SVVEASSN 9 SVVEASSN Sbjct: 2580 SVVEASSN 2587>XP_006716142 Length = 4927 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SVVEASSN 9 SVVEASSN Sbjct: 2597 SVVEASSN 2604>XP_005250088 Length = 4928 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SVVEASSN 9 SVVEASSN Sbjct: 2597 SVVEASSN 2604>XP_006716141 Length = 4959 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SVVEASSN 9 SVVEASSN Sbjct: 2597 SVVEASSN 2604>XP_005250085 Length = 4979 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SVVEASSN 9 SVVEASSN Sbjct: 2597 SVVEASSN 2604>XP_006716140 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SVVEASSN 9 SVVEASSN Sbjct: 2597 SVVEASSN 2604>XP_005250084 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SVVEASSN 9 SVVEASSN Sbjct: 2597 SVVEASSN 2604>XP_005250083 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SVVEASSN 9 SVVEASSN Sbjct: 2596 SVVEASSN 2603>XP_005250082 Length = 4983 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SVVEASSN 9 SVVEASSN Sbjct: 2597 SVVEASSN 2604>NP_006177 Length = 598 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DSVVEASSN 9 DS+VE SSN Sbjct: 484 DSIVEFSSN 492>XP_005246680 Length = 535 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DSVVEASSN 9 DS+VE SSN Sbjct: 421 DSIVEFSSN 429>XP_005246679 Length = 535 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DSVVEASSN 9 DS+VE SSN Sbjct: 421 DSIVEFSSN 429>XP_006712616 Length = 584 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DSVVEASSN 9 DS+VE SSN Sbjct: 470 DSIVEFSSN 478>XP_005246678 Length = 609 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DSVVEASSN 9 DS+VE SSN Sbjct: 495 DSIVEFSSN 503>NP_036223 Length = 502 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DSVVEASSN 9 +S VEASSN Sbjct: 168 NSSVEASSN 176>NP_002079 Length = 980 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DSVVEASSN 9 D +VE SSN Sbjct: 255 DGIVEDSSN 263>XP_006723233 Length = 912 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DSVVEASSN 9 D +VE SSN Sbjct: 187 DGIVEDSSN 195>XP_006723232 Length = 981 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DSVVEASSN 9 D +VE SSN Sbjct: 255 DGIVEDSSN 263>XP_005258879 Length = 942 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DSVVEASSN 9 D +VE SSN Sbjct: 255 DGIVEDSSN 263>XP_005258878 Length = 980 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DSVVEASSN 9 D +VE SSN Sbjct: 255 DGIVEDSSN 263>NP_115627 Length = 1476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DSVVEASS 8 DSV+EAS+ Sbjct: 538 DSVLEASA 545>NP_612410 Length = 273 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSVVEASS 8 DS+ EASS Sbjct: 201 DSIYEASS 208>XP_006718583 Length = 1482 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DSVVEASS 8 DSV+EAS+ Sbjct: 460 DSVLEASA 467>XP_006718582 Length = 1560 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DSVVEASS 8 DSV+EAS+ Sbjct: 538 DSVLEASA 545>NP_003473 Length = 5537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSVVEASS 8 DS+V ASS Sbjct: 4703 DSIVPASS 4710>NP_057095 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSVVEASSN 9 DSV++ +SN Sbjct: 185 DSVIQNASN 193>NP_001019903 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSVVEASSN 9 DSV++ +SN Sbjct: 109 DSVIQNASN 117>NP_004609 Length = 1001 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DSVVEAS 7 DSV+EAS Sbjct: 693 DSVLEAS 699>XP_005256834 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DSVVEAS 7 DSV+EAS Sbjct: 223 DSVLEAS 229>XP_005256833 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DSVVEAS 7 DSV+EAS Sbjct: 598 DSVLEAS 604>XP_006719679 Length = 5536 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSVVEASS 8 DS+V ASS Sbjct: 4702 DSIVPASS 4709>XP_005269219 Length = 5537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSVVEASS 8 DS+V ASS Sbjct: 4703 DSIVPASS 4710>XP_006719678 Length = 5539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSVVEASS 8 DS+V ASS Sbjct: 4705 DSIVPASS 4712>XP_006719677 Length = 5540 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSVVEASS 8 DS+V ASS Sbjct: 4706 DSIVPASS 4713>XP_005245943 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSVVEASSN 9 DSV++ +SN Sbjct: 109 DSVIQNASN 117>XP_006710737 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSVVEASSN 9 DSV++ +SN Sbjct: 109 DSVIQNASN 117>XP_005245946 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSVVEASSN 9 DSV++ +SN Sbjct: 109 DSVIQNASN 117>XP_005245945 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSVVEASSN 9 DSV++ +SN Sbjct: 109 DSVIQNASN 117>XP_005245944 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSVVEASSN 9 DSV++ +SN Sbjct: 109 DSVIQNASN 117>XP_005245942 Length = 401 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSVVEASSN 9 DSV++ +SN Sbjct: 213 DSVIQNASN 221Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.279 0.0975 0.212 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 257,556 Number of extensions: 330 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |