Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_892006 16 5631 NP_149062 16 5631 XP_006715488 16 5631 XP_006715487 16 5631 XP_006715486 16 5631 XP_006715485 16 5631 XP_006715484 16 5631 XP_006715483 16 5631 XP_006715482 16 5631 XP_006715481 16 5631 XP_006715480 16 5631 XP_006715479 16 5631 XP_006715478 16 5631 XP_006715477 16 5631 XP_006715476 16 5631 XP_006715475 16 5631 XP_006715474 16 5631 XP_006715473 16 5631 XP_006715472 16 5631 XP_006715471 16 5631 XP_006715470 16 5631 NP_055797 16 7355 XP_005267484 16 7355 XP_005267483 16 7355 XP_005267482 16 7355 XP_005267481 16 7355 XP_005267480 16 7355 XP_005267479 16 7355 XP_005267478 16 7355 XP_005267477 16 7355 NP_057240 15 9605>NP_892006 Length = 8797 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5970 DSLQSISTK 5978>NP_149062 Length = 8749 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5899 DSLQSISTK 5907>XP_006715488 Length = 8721 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5977 DSLQSISTK 5985>XP_006715487 Length = 8744 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5977 DSLQSISTK 5985>XP_006715486 Length = 8758 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5977 DSLQSISTK 5985>XP_006715485 Length = 8793 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5924 DSLQSISTK 5932>XP_006715484 Length = 8794 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5925 DSLQSISTK 5933>XP_006715483 Length = 8795 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5930 DSLQSISTK 5938>XP_006715482 Length = 8797 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5970 DSLQSISTK 5978>XP_006715481 Length = 8799 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5930 DSLQSISTK 5938>XP_006715480 Length = 8799 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5930 DSLQSISTK 5938>XP_006715479 Length = 8804 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5977 DSLQSISTK 5985>XP_006715478 Length = 8809 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5977 DSLQSISTK 5985>XP_006715477 Length = 8822 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5953 DSLQSISTK 5961>XP_006715476 Length = 8823 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5977 DSLQSISTK 5985>XP_006715475 Length = 8827 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5977 DSLQSISTK 5985>XP_006715474 Length = 8829 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5960 DSLQSISTK 5968>XP_006715473 Length = 8832 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5977 DSLQSISTK 5985>XP_006715472 Length = 8839 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5970 DSLQSISTK 5978>XP_006715471 Length = 8842 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5977 DSLQSISTK 5985>XP_006715470 Length = 8846 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS+QS ST+ Sbjct: 5977 DSLQSISTK 5985>NP_055797 Length = 2341 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS++S STR Sbjct: 369 DSLRSLSTR 377>XP_005267484 Length = 1515 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS++S STR Sbjct: 369 DSLRSLSTR 377>XP_005267483 Length = 2230 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS++S STR Sbjct: 369 DSLRSLSTR 377>XP_005267482 Length = 2243 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS++S STR Sbjct: 369 DSLRSLSTR 377>XP_005267481 Length = 2293 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS++S STR Sbjct: 313 DSLRSLSTR 321>XP_005267480 Length = 2336 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS++S STR Sbjct: 369 DSLRSLSTR 377>XP_005267479 Length = 2344 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS++S STR Sbjct: 369 DSLRSLSTR 377>XP_005267478 Length = 2348 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS++S STR Sbjct: 369 DSLRSLSTR 377>XP_005267477 Length = 2349 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DSVQSASTR 9 DS++S STR Sbjct: 369 DSLRSLSTR 377>NP_057240 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSVQSAST 8 DS+ SAST Sbjct: 23 DSLSSAST 30Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.289 0.0963 0.213 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 188,687 Number of extensions: 148 Number of successful extensions: 31 Number of sequences better than 10000.0: 31 Number of HSP's gapped: 31 Number of HSP's successfully gapped: 31 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |