Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 19 665 NP_000042 16 5631 NP_006166 16 5631 NP_001248392 16 5631 NP_932326 16 5631 NP_001194005 16 5631 NP_543024 16 5631 XP_006723777 16 5631 XP_005260352 16 5631 XP_005271621 16 5631 XP_006718907 16 5631 XP_006718906 16 5631 XP_005271619 16 5631 XP_005271618 16 5631 XP_005269924 16 5631 XP_006717933 16 5631 XP_005269921 16 5631 NP_150094 16 7355 NP_443132 16 7355 NP_937757 16 7355 NP_937756 16 7355 NP_060676 15 9605 NP_525022 15 9605 NP_671729 15 9605 NP_932341 15 9605 XP_005252834 15 9605 XP_006725198 15 9605 XP_006725197 15 9605 XP_006725196 15 9605 XP_006725195 15 9605 XP_006725194 15 9605 XP_005256994 15 9605 XP_005256993 15 9605 XP_005256992 15 9605 XP_006721697 15 9605 XP_006721696 15 9605 XP_005256991 15 9605 XP_005256102 15 9605 XP_006718198 15 9605 XP_005252833 15 9605 XP_006718197 15 9605 XP_006718196 15 9605 XP_006718195 15 9605 XP_005252832 15 9605 XP_006713161 15 9605 XP_006713160 15 9605>NP_004251 Length = 1208 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DSMDFLAVK 9 DS DFLAVK Sbjct: 835 DSTDFLAVK 843>NP_000042 Length = 3056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DSMDFLAV 8 D MDFL + Sbjct: 658 DKMDFLTI 665>NP_006166 Length = 1695 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DSMDFLAVK 9 DS+ FLA K Sbjct: 768 DSLTFLAAK 776>NP_001248392 Length = 1731 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DSMDFLAVK 9 DS+ FLA K Sbjct: 803 DSLTFLAAK 811>NP_932326 Length = 1730 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DSMDFLAVK 9 DS+ FLA K Sbjct: 803 DSLTFLAAK 811>NP_001194005 Length = 423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DSMDFLA 7 D+MDF+A Sbjct: 73 DTMDFIA 79>NP_543024 Length = 572 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DSMDFLA 7 D+MDF+A Sbjct: 73 DTMDFIA 79>XP_006723777 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DSMDFLA 7 D+MDF+A Sbjct: 73 DTMDFIA 79>XP_005260352 Length = 576 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DSMDFLA 7 D+MDF+A Sbjct: 73 DTMDFIA 79>XP_005271621 Length = 2708 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DSMDFLAV 8 D MDFL + Sbjct: 310 DKMDFLTI 317>XP_006718907 Length = 3050 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DSMDFLAV 8 D MDFL + Sbjct: 658 DKMDFLTI 665>XP_006718906 Length = 3056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DSMDFLAV 8 D MDFL + Sbjct: 658 DKMDFLTI 665>XP_005271619 Length = 3056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DSMDFLAV 8 D MDFL + Sbjct: 658 DKMDFLTI 665>XP_005271618 Length = 3056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DSMDFLAV 8 D MDFL + Sbjct: 658 DKMDFLTI 665>XP_005269924 Length = 1627 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DSMDFLAVK 9 DS+ FLA K Sbjct: 803 DSLTFLAAK 811>XP_006717933 Length = 1696 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DSMDFLAVK 9 DS+ FLA K Sbjct: 803 DSLTFLAAK 811>XP_005269921 Length = 1696 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DSMDFLAVK 9 DS+ FLA K Sbjct: 768 DSLTFLAAK 776>NP_150094 Length = 3564 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DFLAVK 9 DFLAVK Sbjct: 636 DFLAVK 641>NP_443132 Length = 3538 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DFLAVK 9 DFLAVK Sbjct: 669 DFLAVK 674>NP_937757 Length = 3667 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DFLAVK 9 DFLAVK Sbjct: 733 DFLAVK 738>NP_937756 Length = 3707 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DFLAVK 9 DFLAVK Sbjct: 773 DFLAVK 778>NP_060676 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DSMDFL 6 DSMDF+ Sbjct: 178 DSMDFV 183>NP_525022 Length = 1624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DSMDFL 6 DSMD+L Sbjct: 1189 DSMDYL 1194>NP_671729 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSMDFLAVK 9 DS+D +A+K Sbjct: 132 DSVDTVAIK 140>NP_932341 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SMDFLAVK 9 S D+LAVK Sbjct: 246 SQDWLAVK 253>XP_005252834 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SMDFLAVK 9 S D+LAVK Sbjct: 246 SQDWLAVK 253>XP_006725198 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SMDFLAVK 9 S D+LAVK Sbjct: 246 SQDWLAVK 253>XP_006725197 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SMDFLAVK 9 S D+LAVK Sbjct: 246 SQDWLAVK 253>XP_006725196 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SMDFLAVK 9 S D+LAVK Sbjct: 246 SQDWLAVK 253>XP_006725195 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SMDFLAVK 9 S D+LAVK Sbjct: 246 SQDWLAVK 253>XP_006725194 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SMDFLAVK 9 S D+LAVK Sbjct: 246 SQDWLAVK 253>XP_005256994 Length = 1443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DSMDFL 6 DSMD+L Sbjct: 1197 DSMDYL 1202>XP_005256993 Length = 1543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DSMDFL 6 DSMD+L Sbjct: 1108 DSMDYL 1113>XP_005256992 Length = 1543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DSMDFL 6 DSMD+L Sbjct: 1108 DSMDYL 1113>XP_006721697 Length = 1625 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DSMDFL 6 DSMD+L Sbjct: 1197 DSMDYL 1202>XP_006721696 Length = 1632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DSMDFL 6 DSMD+L Sbjct: 1197 DSMDYL 1202>XP_005256991 Length = 1632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DSMDFL 6 DSMD+L Sbjct: 1197 DSMDYL 1202>XP_005256102 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DSMDFL 6 DSMDF+ Sbjct: 111 DSMDFV 116>XP_006718198 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SMDFLAVK 9 S D+LAVK Sbjct: 246 SQDWLAVK 253>XP_005252833 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SMDFLAVK 9 S D+LAVK Sbjct: 246 SQDWLAVK 253>XP_006718197 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SMDFLAVK 9 S D+LAVK Sbjct: 246 SQDWLAVK 253>XP_006718196 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SMDFLAVK 9 S D+LAVK Sbjct: 246 SQDWLAVK 253>XP_006718195 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SMDFLAVK 9 S D+LAVK Sbjct: 246 SQDWLAVK 253>XP_005252832 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SMDFLAVK 9 S D+LAVK Sbjct: 246 SQDWLAVK 253>XP_006713161 Length = 103 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSMDFLAVK 9 DS+D +A+K Sbjct: 79 DSVDTVAIK 87>XP_006713160 Length = 103 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSMDFLAVK 9 DS+D +A+K Sbjct: 79 DSVDTVAIK 87Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.136 0.363 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 397,824 Number of extensions: 498 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |