Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 19 869 XP_005265800 19 869 XP_006714103 19 869 XP_006714102 19 869 NP_002600 18 1135 XP_005268521 18 1135 XP_006709998 17 3301 NP_001222 17 4312 NP_694551 16 5631 NP_478136 16 7355 NP_005046 16 7355 NP_690051 16 7355 NP_116034 16 7355 NP_001229392 16 7355 NP_006038 16 7355 NP_001012267 16 7355 NP_001185769 16 7355 NP_001185767 16 7355 NP_057351 16 7355 NP_001273898 16 7355 NP_001273900 16 7355 XP_005253100 16 7355 XP_005253099 16 7355 NP_001001920 16 7355 NP_001439 15 9605 NP_001276049 15 9605 NP_001276048 15 9605 NP_001276050 15 9605 NP_115602 15 9605 NP_003671 15 9605 NP_003238 15 9605 NP_775483 15 9605 NP_055897 15 9605 NP_071322 15 9605 XP_005270110 15 9605 XP_006717878 15 9605 XP_005269804 15 9605 XP_005269803 15 9605 XP_005269802 15 9605 XP_005269801 15 9605 XP_005251669 15 9605 XP_005251668 15 9605 XP_005251666 15 9605 XP_005251665 15 9605>NP_006197 Length = 1089 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DSIYVSKGS 9 DS YVSKGS Sbjct: 846 DSNYVSKGS 854>XP_005265800 Length = 1089 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DSIYVSKGS 9 DS YVSKGS Sbjct: 846 DSNYVSKGS 854>XP_006714103 Length = 1111 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DSIYVSKGS 9 DS YVSKGS Sbjct: 868 DSNYVSKGS 876>XP_006714102 Length = 1114 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DSIYVSKGS 9 DS YVSKGS Sbjct: 871 DSNYVSKGS 879>NP_002600 Length = 1106 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DSIYVSKGS 9 DS Y+SKGS Sbjct: 854 DSNYISKGS 862>XP_005268521 Length = 1042 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DSIYVSKGS 9 DS Y+SKGS Sbjct: 790 DSNYISKGS 798>XP_006709998 Length = 187 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DSIYVSKGS 9 +S YVSKGS Sbjct: 38 ESGYVSKGS 46>NP_001222 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSIYVSKG 8 DS+YV KG Sbjct: 127 DSMYVFKG 134>NP_694551 Length = 534 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SIYVSKG 8 SIYVS+G Sbjct: 417 SIYVSEG 423>NP_478136 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IYVSKGS 9 IYV KGS Sbjct: 84 IYVHKGS 90>NP_005046 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSIYVSKG 8 +SIY SKG Sbjct: 333 ESIYRSKG 340>NP_690051 Length = 932 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DSIYVSKG 8 DSIY++ G Sbjct: 458 DSIYIAYG 465>NP_116034 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSIYVSKG 8 +SIY SKG Sbjct: 274 ESIYRSKG 281>NP_001229392 Length = 262 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IYVSKGS 9 IYV KGS Sbjct: 84 IYVHKGS 90>NP_006038 Length = 932 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DSIYVSKG 8 DSIY++ G Sbjct: 458 DSIYIAYG 465>NP_001012267 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DSIYVSKG 8 D++Y+S+G Sbjct: 193 DAVYLSEG 200>NP_001185769 Length = 932 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DSIYVSKG 8 DSIY++ G Sbjct: 458 DSIYIAYG 465>NP_001185767 Length = 932 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DSIYVSKG 8 DSIY++ G Sbjct: 458 DSIYIAYG 465>NP_057351 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IYVSKGS 9 +YVS+GS Sbjct: 215 LYVSRGS 221>NP_001273898 Length = 176 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DSIYVSKG 8 D++Y+S+G Sbjct: 81 DAVYLSEG 88>NP_001273900 Length = 115 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DSIYVSKG 8 D++Y+S+G Sbjct: 20 DAVYLSEG 27>XP_005253100 Length = 371 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSIYVSKG 8 +SIY SKG Sbjct: 292 ESIYRSKG 299>XP_005253099 Length = 394 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSIYVSKG 8 +SIY SKG Sbjct: 315 ESIYRSKG 322>NP_001001920 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DSIYVSK 7 DS+YV+K Sbjct: 137 DSLYVTK 143>NP_001439 Length = 556 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IYVSKG 8 +YVSKG Sbjct: 36 LYVSKG 41>NP_001276049 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DSIYVSKG 8 DSIY KG Sbjct: 98 DSIYRCKG 105>NP_001276048 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DSIYVSKG 8 DSIY KG Sbjct: 98 DSIYRCKG 105>NP_001276050 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DSIYVSKG 8 DSIY KG Sbjct: 98 DSIYRCKG 105>NP_115602 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DSIYVSKG 8 DSIY KG Sbjct: 98 DSIYRCKG 105>NP_003671 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DSIYVSK 7 DS+YV K Sbjct: 385 DSLYVEK 391>NP_003238 Length = 1172 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IYVSKGS 9 +YV+KGS Sbjct: 190 MYVAKGS 196>NP_775483 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSIYVSKG 8 DSI VS+G Sbjct: 217 DSIIVSEG 224>NP_055897 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 DSIYVSK 7 DS+Y++K Sbjct: 304 DSLYITK 310>NP_071322 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DSIYVSKGS 9 DS+Y+S+ + Sbjct: 129 DSLYISQAN 137>XP_005270110 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DSIYVSKGS 9 DS+Y+S+ + Sbjct: 310 DSLYISQAN 318>XP_006717878 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSIYVSKG 8 DSI VS+G Sbjct: 217 DSIIVSEG 224>XP_005269804 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSIYVSKG 8 DSI VS+G Sbjct: 54 DSIIVSEG 61>XP_005269803 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSIYVSKG 8 DSI VS+G Sbjct: 217 DSIIVSEG 224>XP_005269802 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSIYVSKG 8 DSI VS+G Sbjct: 217 DSIIVSEG 224>XP_005269801 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSIYVSKG 8 DSI VS+G Sbjct: 217 DSIIVSEG 224>XP_005251669 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DSIYVSKG 8 DSIY KG Sbjct: 98 DSIYRCKG 105>XP_005251668 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DSIYVSKG 8 DSIY KG Sbjct: 98 DSIYRCKG 105>XP_005251666 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DSIYVSKG 8 DSIY KG Sbjct: 98 DSIYRCKG 105>XP_005251665 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DSIYVSKG 8 DSIY KG Sbjct: 98 DSIYRCKG 105Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.123 0.314 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 532,581 Number of extensions: 1011 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |