Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 20 299 NP_036462 20 299 NP_001243397 20 299 XP_005269721 20 299 NP_001092882 18 1482 NP_006757 18 1482 NP_001092883 18 1482 XP_005273706 18 1482 NP_001122405 16 5631 NP_001122406 16 5631 NP_775873 16 5631 NP_001273683 16 5631 NP_597734 16 5631 NP_001092313 16 5631 XP_006719585 16 5631 XP_006719584 16 5631 XP_005269101 16 5631 XP_006719583 16 5631 NP_001175 16 7355 NP_001269285 16 7355 NP_599028 16 7355 NP_439897 16 7355 NP_001269286 16 7355 NP_068813 15 9605 NP_001275993 15 9605 NP_000225 15 9605 NP_001275992 15 9605 NP_612441 15 9605 NP_057311 15 9605 NP_055641 15 9605 NP_055098 15 9605 NP_001269862 15 9605 NP_116208 15 9605 NP_001269679 15 9605 NP_003598 15 9605 XP_006723280 15 9605 XP_006723279 15 9605 XP_005258991 15 9605 XP_006723278 15 9605 XP_005253888 15 9605 XP_005253887 15 9605 XP_006711900 15 9605 XP_005273381 15 9605 XP_005273380 15 9605 XP_005273379 15 9605 XP_006711899 15 9605 XP_005273378 15 9605 XP_005273377 15 9605 XP_006711898 15 9605 XP_006711897 15 9605 XP_005273375 15 9605 XP_005273374 15 9605 XP_005245308 15 9605 XP_006711439 15 9605 XP_006711438 15 9605 XP_006711437 15 9605>NP_001243398 Length = 1781 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DSETVQAIQ 9 DSETVQA+Q Sbjct: 1246 DSETVQAVQ 1254>NP_036462 Length = 2073 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DSETVQAIQ 9 DSETVQA+Q Sbjct: 1538 DSETVQAVQ 1546>NP_001243397 Length = 1890 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DSETVQAIQ 9 DSETVQA+Q Sbjct: 1355 DSETVQAVQ 1363>XP_005269721 Length = 2073 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DSETVQAIQ 9 DSETVQA+Q Sbjct: 1538 DSETVQAVQ 1546>NP_001092882 Length = 2004 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DSETVQAIQ 9 D ETVQA+Q Sbjct: 1421 DLETVQAVQ 1429>NP_006757 Length = 2004 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DSETVQAIQ 9 D ETVQA+Q Sbjct: 1421 DLETVQAVQ 1429>NP_001092883 Length = 2004 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DSETVQAIQ 9 D ETVQA+Q Sbjct: 1421 DLETVQAVQ 1429>XP_005273706 Length = 1997 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DSETVQAIQ 9 D ETVQA+Q Sbjct: 1414 DLETVQAVQ 1422>NP_001122405 Length = 1093 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DSETVQA 7 DS+TVQA Sbjct: 889 DSDTVQA 895>NP_001122406 Length = 1109 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DSETVQA 7 DS+TVQA Sbjct: 889 DSDTVQA 895>NP_775873 Length = 1576 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DSETVQA 7 DSET+QA Sbjct: 1409 DSETLQA 1415>NP_001273683 Length = 1230 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DSETVQA 7 DS+TVQA Sbjct: 858 DSDTVQA 864>NP_597734 Length = 1261 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DSETVQA 7 DS+TVQA Sbjct: 889 DSDTVQA 895>NP_001092313 Length = 633 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSETVQAI 8 DSE +QAI Sbjct: 319 DSEEIQAI 326>XP_006719585 Length = 1459 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DSETVQA 7 DSET+QA Sbjct: 1292 DSETLQA 1298>XP_006719584 Length = 1515 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DSETVQA 7 DSET+QA Sbjct: 1348 DSETLQA 1354>XP_005269101 Length = 1577 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DSETVQA 7 DSET+QA Sbjct: 1410 DSETLQA 1416>XP_006719583 Length = 1586 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DSETVQA 7 DSET+QA Sbjct: 1419 DSETLQA 1425>NP_001175 Length = 2644 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSETVQAI 8 DSETV+ I Sbjct: 1324 DSETVEPI 1331>NP_001269285 Length = 656 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSETVQAIQ 9 DSET+Q ++ Sbjct: 495 DSETLQQVK 503>NP_599028 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSETVQAIQ 9 DSET+Q ++ Sbjct: 495 DSETLQQVK 503>NP_439897 Length = 656 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSETVQAIQ 9 DSET+Q ++ Sbjct: 495 DSETLQQVK 503>NP_001269286 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSETVQAIQ 9 DSET+Q ++ Sbjct: 194 DSETLQQVK 202>NP_068813 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DSETVQAIQ 9 DS+TVQ Q Sbjct: 202 DSKTVQRTQ 210>NP_001275993 Length = 851 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSETVQAI 8 DSE +QAI Sbjct: 718 DSEELQAI 725>NP_000225 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSETVQAI 8 DSE +QAI Sbjct: 786 DSEELQAI 793>NP_001275992 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSETVQAI 8 DSE +QAI Sbjct: 755 DSEELQAI 762>NP_612441 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DSETVQAIQ 9 D+E V A+Q Sbjct: 254 DTEAVSAVQ 262>NP_057311 Length = 1405 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSETVQAI 8 DSETV+ I Sbjct: 284 DSETVENI 291>NP_055641 Length = 1638 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SETVQAIQ 9 ++TVQA+Q Sbjct: 466 TQTVQALQ 473>NP_055098 Length = 1254 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSETVQAI 8 DSETV+ I Sbjct: 126 DSETVENI 133>NP_001269862 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSETVQAIQ 9 D++TV A+Q Sbjct: 13 DNQTVLAVQ 21>NP_116208 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DSETVQAIQ 9 D++TV A+Q Sbjct: 13 DNQTVLAVQ 21>NP_001269679 Length = 883 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSETVQAI 8 DSETV+ I Sbjct: 89 DSETVENI 96>NP_003598 Length = 1719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SETVQAIQ 9 ++TVQA+Q Sbjct: 466 TQTVQALQ 473>XP_006723280 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSETVQAI 8 DSE +QAI Sbjct: 380 DSEELQAI 387>XP_006723279 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSETVQAI 8 DSE +QAI Sbjct: 786 DSEELQAI 793>XP_005258991 Length = 889 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSETVQAI 8 DSE +QAI Sbjct: 756 DSEELQAI 763>XP_006723278 Length = 918 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSETVQAI 8 DSE +QAI Sbjct: 785 DSEELQAI 792>XP_005253888 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DSETVQAIQ 9 D+E V A+Q Sbjct: 254 DTEAVSAVQ 262>XP_005253887 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DSETVQAIQ 9 D+E V A+Q Sbjct: 254 DTEAVSAVQ 262>XP_006711900 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SETVQAIQ 9 ++TVQA+Q Sbjct: 466 TQTVQALQ 473>XP_005273381 Length = 1732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SETVQAIQ 9 ++TVQA+Q Sbjct: 466 TQTVQALQ 473>XP_005273380 Length = 1751 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SETVQAIQ 9 ++TVQA+Q Sbjct: 466 TQTVQALQ 473>XP_005273379 Length = 1754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SETVQAIQ 9 ++TVQA+Q Sbjct: 466 TQTVQALQ 473>XP_006711899 Length = 1770 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SETVQAIQ 9 ++TVQA+Q Sbjct: 466 TQTVQALQ 473>XP_005273378 Length = 1781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SETVQAIQ 9 ++TVQA+Q Sbjct: 466 TQTVQALQ 473>XP_005273377 Length = 1794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SETVQAIQ 9 ++TVQA+Q Sbjct: 466 TQTVQALQ 473>XP_006711898 Length = 1797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SETVQAIQ 9 ++TVQA+Q Sbjct: 466 TQTVQALQ 473>XP_006711897 Length = 1816 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SETVQAIQ 9 ++TVQA+Q Sbjct: 466 TQTVQALQ 473>XP_005273375 Length = 1829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SETVQAIQ 9 ++TVQA+Q Sbjct: 466 TQTVQALQ 473>XP_005273374 Length = 1832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SETVQAIQ 9 ++TVQA+Q Sbjct: 466 TQTVQALQ 473>XP_005245308 Length = 1092 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSETVQAI 8 DSETV+ I Sbjct: 126 DSETVENI 133>XP_006711439 Length = 1210 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSETVQAI 8 DSETV+ I Sbjct: 89 DSETVENI 96>XP_006711438 Length = 1217 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSETVQAI 8 DSETV+ I Sbjct: 89 DSETVENI 96>XP_006711437 Length = 1247 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DSETVQAI 8 DSETV+ I Sbjct: 126 DSETVENI 133Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.110 0.251 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 400,152 Number of extensions: 687 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |