Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001460 18 1935 NP_001275906 18 1935 NP_001275905 18 1935 NP_001275907 18 1935 NP_001182036 17 3301 NP_112218 17 3301 NP_001182035 17 3301 NP_001017388 17 3301 NP_001182037 17 3301 XP_006714095 17 3301 XP_006714094 17 3301 NP_002966 17 4312 NP_060009 17 4312 XP_006721125 17 4312 NP_004374 16 5631 NP_001120662 16 5631 NP_000085 16 5631 NP_060626 16 5631 NP_056193 16 5631 XP_005254222 16 5631 XP_006711547 16 5631 NP_941374 16 7355 NP_065682 16 7355 NP_001036128 16 7355 NP_001036130 16 7355 NP_001036129 16 7355 NP_001252522 16 7355 NP_001252521 16 7355 NP_001252523 16 7355 NP_110390 16 7355 XP_006724753 16 7355 XP_006724752 16 7355 XP_006724751 16 7355 NP_001273763 15 9605 NP_002927 15 9605 NP_079203 15 9605 NP_003025 15 9605 XP_006722160 15 9605 XP_006722159 15 9605 XP_005253526 15 9605 NP_061720 15 9605>NP_001460 Length = 609 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DRRETGLFL 9 D R+TG+FL Sbjct: 192 DLRDTGIFL 200>NP_001275906 Length = 568 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DRRETGLFL 9 D R+TG+FL Sbjct: 151 DLRDTGIFL 159>NP_001275905 Length = 609 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DRRETGLFL 9 D R+TG+FL Sbjct: 192 DLRDTGIFL 200>NP_001275907 Length = 559 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DRRETGLFL 9 D R+TG+FL Sbjct: 142 DLRDTGIFL 150>NP_001182036 Length = 811 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DRRETGLF 8 DRR+ GLF Sbjct: 760 DRRKCGLF 767>NP_112218 Length = 811 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DRRETGLF 8 DRR+ GLF Sbjct: 760 DRRKCGLF 767>NP_001182035 Length = 811 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DRRETGLF 8 DRR+ GLF Sbjct: 760 DRRKCGLF 767>NP_001017388 Length = 811 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DRRETGLF 8 DRR+ GLF Sbjct: 760 DRRKCGLF 767>NP_001182037 Length = 797 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DRRETGLF 8 DRR+ GLF Sbjct: 746 DRRKCGLF 753>XP_006714095 Length = 797 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DRRETGLF 8 DRR+ GLF Sbjct: 746 DRRKCGLF 753>XP_006714094 Length = 797 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DRRETGLF 8 DRR+ GLF Sbjct: 746 DRRKCGLF 753>NP_002966 Length = 323 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DRRETGLFL 9 DRR GL+L Sbjct: 244 DRRAEGLYL 252>NP_060009 Length = 4116 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DRRETGLF 8 DRR GLF Sbjct: 2121 DRRRKGLF 2128>XP_006721125 Length = 4070 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DRRETGLF 8 DRR GLF Sbjct: 2075 DRRRKGLF 2082>NP_004374 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETGLFL 9 ETGLFL Sbjct: 100 ETGLFL 105>NP_001120662 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETGLFL 9 ETGLFL Sbjct: 100 ETGLFL 105>NP_000085 Length = 2944 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RRETGL 7 RRETGL Sbjct: 449 RRETGL 454>NP_060626 Length = 4363 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DRRETGLF 8 +R+E GLF Sbjct: 1587 ERKENGLF 1594>NP_056193 Length = 4388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DRRETGLF 8 +R+E GLF Sbjct: 1587 ERKENGLF 1594>XP_005254222 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETGLFL 9 ETGLFL Sbjct: 100 ETGLFL 105>XP_006711547 Length = 572 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DRRETGL 7 DRR TGL Sbjct: 32 DRRATGL 38>NP_941374 Length = 1083 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DRRETGLFL 9 DR+ TGL L Sbjct: 128 DRKSTGLKL 136>NP_065682 Length = 1006 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DRRETGLFL 9 DR+ TGL L Sbjct: 51 DRKSTGLKL 59>NP_001036128 Length = 1062 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DRRETGLFL 9 DR+ TGL L Sbjct: 107 DRKSTGLKL 115>NP_001036130 Length = 1006 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DRRETGLFL 9 DR+ TGL L Sbjct: 51 DRKSTGLKL 59>NP_001036129 Length = 1006 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DRRETGLFL 9 DR+ TGL L Sbjct: 51 DRKSTGLKL 59>NP_001252522 Length = 1075 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DRRETGLFL 9 DR+ TGL L Sbjct: 120 DRKSTGLKL 128>NP_001252521 Length = 1085 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DRRETGLFL 9 DR+ TGL L Sbjct: 130 DRKSTGLKL 138>NP_001252523 Length = 930 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DRRETGLFL 9 DR+ TGL L Sbjct: 51 DRKSTGLKL 59>NP_110390 Length = 282 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DRRETG 6 DR+ETG Sbjct: 201 DRKETG 206>XP_006724753 Length = 272 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DRRETG 6 DR+ETG Sbjct: 191 DRKETG 196>XP_006724752 Length = 273 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DRRETG 6 DR+ETG Sbjct: 192 DRKETG 197>XP_006724751 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DRRETG 6 DR+ETG Sbjct: 202 DRKETG 207>NP_001273763 Length = 260 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RETGLFL 9 R+TG+FL Sbjct: 9 RKTGVFL 15>NP_002927 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RETGLFL 9 R+TG+FL Sbjct: 35 RKTGVFL 41>NP_079203 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRETGLF 8 R+ETGL+ Sbjct: 160 RKETGLW 166>NP_003025 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRETGLFL 9 R TGLFL Sbjct: 272 RLSTGLFL 279>XP_006722160 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRETGLF 8 R+ETGL+ Sbjct: 160 RKETGLW 166>XP_006722159 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRETGLF 8 R+ETGL+ Sbjct: 160 RKETGLW 166>XP_005253526 Length = 213 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRETGLFL 9 R TGLFL Sbjct: 129 RLSTGLFL 136>NP_061720 Length = 4024 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RETGLFL 9 RETG F+ Sbjct: 923 RETGTFI 929Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.154 0.446 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 527,935 Number of extensions: 734 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |