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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_570711                                                              20     299
NP_570712                                                              20     299
NP_570714                                                              20     299
NP_570713                                                              20     299
NP_570716                                                              20     299
NP_000235                                                              20     299
NP_570715                                                              20     299
XP_006718620                                                           20     299
XP_005274059                                                           20     299
XP_005274060                                                           20     299
XP_005274058                                                           20     299
NP_001274448                                                           16    5631
NP_001274449                                                           16    5631
NP_068659                                                              16    5631
NP_068658                                                              16    5631
NP_004349                                                              16    5631
NP_001274447                                                           16    5631
NP_001274453                                                           16    5631
NP_001274445                                                           16    5631
NP_001274451                                                           16    5631
NP_001274446                                                           16    5631
NP_060382                                                              16    7355
NP_001158608                                                           16    7355
XP_005263140                                                           16    7355

>NP_570711
          Length = 610

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DRKMEVVFM 9
           DRKMEV FM
Sbjct: 231 DRKMEVAFM 239



>NP_570712
          Length = 615

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DRKMEVVFM 9
           DRKMEV FM
Sbjct: 236 DRKMEVAFM 244



>NP_570714
          Length = 615

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DRKMEVVFM 9
           DRKMEV FM
Sbjct: 236 DRKMEVAFM 244



>NP_570713
          Length = 615

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DRKMEVVFM 9
           DRKMEV FM
Sbjct: 236 DRKMEVAFM 244



>NP_570716
          Length = 615

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DRKMEVVFM 9
           DRKMEV FM
Sbjct: 236 DRKMEVAFM 244



>NP_000235
          Length = 615

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DRKMEVVFM 9
           DRKMEV FM
Sbjct: 236 DRKMEVAFM 244



>NP_570715
          Length = 615

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DRKMEVVFM 9
           DRKMEV FM
Sbjct: 236 DRKMEVAFM 244



>XP_006718620
          Length = 610

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DRKMEVVFM 9
           DRKMEV FM
Sbjct: 231 DRKMEVAFM 239



>XP_005274059
          Length = 610

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DRKMEVVFM 9
           DRKMEV FM
Sbjct: 231 DRKMEVAFM 239



>XP_005274060
          Length = 610

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DRKMEVVFM 9
           DRKMEV FM
Sbjct: 231 DRKMEVAFM 239



>XP_005274058
          Length = 610

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DRKMEVVFM 9
           DRKMEV FM
Sbjct: 231 DRKMEVAFM 239



>NP_001274448
          Length = 468

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DRKMEV 6
           DRKMEV
Sbjct: 128 DRKMEV 133



>NP_001274449
          Length = 468

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DRKMEV 6
           DRKMEV
Sbjct: 128 DRKMEV 133



>NP_068659
          Length = 580

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DRKMEV 6
           DRKMEV
Sbjct: 240 DRKMEV 245



>NP_068658
          Length = 539

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DRKMEV 6
           DRKMEV
Sbjct: 199 DRKMEV 204



>NP_004349
          Length = 566

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DRKMEV 6
           DRKMEV
Sbjct: 226 DRKMEV 231



>NP_001274447
          Length = 489

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DRKMEV 6
           DRKMEV
Sbjct: 176 DRKMEV 181



>NP_001274453
          Length = 388

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1  DRKMEV 6
          DRKMEV
Sbjct: 48 DRKMEV 53



>NP_001274445
          Length = 516

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DRKMEV 6
           DRKMEV
Sbjct: 176 DRKMEV 181



>NP_001274451
          Length = 427

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1  DRKMEV 6
          DRKMEV
Sbjct: 87 DRKMEV 92



>NP_001274446
          Length = 502

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DRKMEV 6
           DRKMEV
Sbjct: 162 DRKMEV 167



>NP_060382
          Length = 1022

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RKMEVVF 8
           +KME+VF
Sbjct: 962 QKMEIVF 968



>NP_001158608
          Length = 986

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RKMEVVF 8
           +KME+VF
Sbjct: 926 QKMEIVF 932



>XP_005263140
          Length = 1034

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RKMEVVF 8
           +KME+VF
Sbjct: 974 QKMEIVF 980



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.340    0.144    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 386,288
Number of extensions: 587
Number of successful extensions: 24
Number of sequences better than 10000.0: 24
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 24
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.5 bits)
S2: 28 (15.4 bits)