Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001138135 17 2528 NP_004054 17 2528 NP_001186084 17 3301 NP_008998 17 3301 NP_004678 17 4312 XP_006722231 17 4312 XP_005257843 17 4312 XP_005257842 17 4312 XP_005257841 17 4312 NP_004554 16 5631 NP_001018083 16 5631 NP_078966 16 5631 NP_004958 16 5631 NP_060487 16 5631 XP_006723004 16 5631 XP_006720221 16 5631 XP_005267783 16 5631 XP_005269994 16 5631 NP_001243000 16 7355 NP_001028895 16 7355 NP_659436 16 7355 XP_005257603 16 7355 XP_006722058 16 7355 XP_005257602 16 7355 XP_005251336 16 7355 XP_006716527 16 7355 NP_004898 16 7355 NP_001241646 15 9605 NP_001135441 15 9605 NP_001135442 15 9605 NP_001341 15 9605 NP_001171695 15 9605 NP_001007023 15 9605 NP_001171694 15 9605 NP_001280 15 9605 NP_065780 15 9605 NP_787063 15 9605 NP_056076 15 9605 NP_037501 15 9605 NP_075463 15 9605 XP_006725534 15 9605 XP_006719812 15 9605 XP_005271681 15 9605 XP_005271114 15 9605 XP_005271113 15 9605 XP_005271112 15 9605 XP_005271111 15 9605 NP_443155 15 9605>NP_001138135 Length = 832 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DREAENTAS 9 DR+ ENTA+ Sbjct: 366 DRDEENTAN 374>NP_004054 Length = 832 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DREAENTAS 9 DR+ ENTA+ Sbjct: 366 DRDEENTAN 374>NP_001186084 Length = 581 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DREAENTA 8 DRE +NTA Sbjct: 112 DRETKNTA 119>NP_008998 Length = 611 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DREAENTA 8 DRE +NTA Sbjct: 112 DRETKNTA 119>NP_004678 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DREAENTAS 9 D+E EN AS Sbjct: 201 DKELENVAS 209>XP_006722231 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DREAENTAS 9 D+E EN AS Sbjct: 201 DKELENVAS 209>XP_005257843 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DREAENTAS 9 D+E EN AS Sbjct: 201 DKELENVAS 209>XP_005257842 Length = 1199 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DREAENTAS 9 D+E EN AS Sbjct: 205 DKELENVAS 213>XP_005257841 Length = 1209 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DREAENTAS 9 D+E EN AS Sbjct: 215 DKELENVAS 223>NP_004554 Length = 640 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EAENTAS 9 EAENTA+ Sbjct: 67 EAENTAT 73>NP_001018083 Length = 441 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EAENTAS 9 EAENTA+ Sbjct: 67 EAENTAT 73>NP_078966 Length = 14507 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DREAENTAS 9 +RE+E TAS Sbjct: 10562 NRESETTAS 10570>NP_004958 Length = 317 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DREAENT 7 D EAENT Sbjct: 99 DSEAENT 105>NP_060487 Length = 898 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DREAENTAS 9 DR ENT S Sbjct: 738 DRSPENTGS 746>XP_006723004 Length = 6443 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DREAENTAS 9 +RE+E TAS Sbjct: 2476 NRESETTAS 2484>XP_006720221 Length = 497 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EAENTAS 9 EAENTA+ Sbjct: 67 EAENTAT 73>XP_005267783 Length = 608 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EAENTAS 9 EAENTA+ Sbjct: 67 EAENTAT 73>XP_005269994 Length = 898 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DREAENTAS 9 DR ENT S Sbjct: 738 DRSPENTGS 746>NP_001243000 Length = 5207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 REAENTA 8 REAEN A Sbjct: 2465 REAENVA 2471>NP_001028895 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DREAENTAS 9 D E ENT S Sbjct: 45 DHEKENTRS 53>NP_659436 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DREAENTA 8 DRE+EN + Sbjct: 617 DRESENAS 624>XP_005257603 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 REAENTA 8 REAEN A Sbjct: 2514 REAENVA 2520>XP_006722058 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 REAENTA 8 REAEN A Sbjct: 2514 REAENVA 2520>XP_005257602 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 REAENTA 8 REAEN A Sbjct: 2514 REAENVA 2520>XP_005251336 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DREAENTAS 9 D E ENT S Sbjct: 45 DHEKENTRS 53>XP_006716527 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DREAENTAS 9 D E ENT S Sbjct: 45 DHEKENTRS 53>NP_004898 Length = 223 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 REAENTA 8 REAE+TA Sbjct: 75 REAESTA 81>NP_001241646 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AENTAS 9 AENTAS Sbjct: 96 AENTAS 101>NP_001135441 Length = 740 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AENTAS 9 AENTAS Sbjct: 171 AENTAS 176>NP_001135442 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AENTAS 9 AENTAS Sbjct: 183 AENTAS 188>NP_001341 Length = 740 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 AENTAS 9 AENTAS Sbjct: 171 AENTAS 176>NP_001171695 Length = 591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DREAENT 7 D E+ENT Sbjct: 139 DNESENT 145>NP_001007023 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DREAENT 7 D E+ENT Sbjct: 139 DNESENT 145>NP_001171694 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DREAENT 7 D E+ENT Sbjct: 139 DNESENT 145>NP_001280 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DREAENT 7 D+E ENT Sbjct: 232 DKEIENT 238>NP_065780 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DREAENT 7 D E+ENT Sbjct: 139 DNESENT 145>NP_787063 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DREAEN 6 DRE+EN Sbjct: 169 DRESEN 174>NP_056076 Length = 1498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DREAENTAS 9 +RE +NT S Sbjct: 424 EREVDNTLS 432>NP_037501 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DREAEN 6 DRE+EN Sbjct: 169 DRESEN 174>NP_075463 Length = 3013 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DREAENTAS 9 DRE + TAS Sbjct: 1390 DREGDVTAS 1398>XP_006725534 Length = 1174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DREAENT 7 D+E ENT Sbjct: 403 DKELENT 409>XP_006719812 Length = 3019 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DREAENTAS 9 DRE + TAS Sbjct: 1387 DREGDVTAS 1395>XP_005271681 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DREAENTA 8 DRE +NT+ Sbjct: 2 DREKKNTS 9>XP_005271114 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DREAENT 7 D E+ENT Sbjct: 139 DNESENT 145>XP_005271113 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DREAENT 7 D E+ENT Sbjct: 139 DNESENT 145>XP_005271112 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DREAENT 7 D E+ENT Sbjct: 139 DNESENT 145>XP_005271111 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DREAENT 7 D E+ENT Sbjct: 139 DNESENT 145>NP_443155 Length = 1325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DREAENT 7 D+E ENT Sbjct: 554 DKELENT 560Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.282 0.0993 0.232 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 483,912 Number of extensions: 754 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |