Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 22 134 XP_006716142 22 134 XP_005250088 22 134 XP_006716141 22 134 XP_005250085 22 134 XP_006716140 22 134 XP_005250084 22 134 XP_005250083 22 134 XP_005250082 22 134 NP_001094092 17 2528 NP_001275699 17 2528 NP_001094091 17 2528 NP_060411 17 2528 NP_001275700 17 2528 XP_006722029 17 2528 XP_005257544 17 2528 NP_665682 16 5631 NP_149353 16 5631 NP_149355 16 5631 NP_149354 16 5631 NP_006110 16 5631 NP_001193318 16 5631 NP_001136028 16 5631 NP_036616 16 5631 NP_001136029 16 5631 NP_036617 16 5631 NP_001188410 16 5631 NP_115912 16 5631 NP_001188411 16 5631 NP_001188409 16 5631 XP_006712295 16 5631 XP_006712294 16 5631 NP_005236 16 7355 NP_078813 16 7355 NP_775823 16 7355 NP_001127942 16 7355 XP_006720016 16 7355 XP_006714202 16 7355 XP_005262892 16 7355 XP_005262891 16 7355 NP_002022 15 9605 NP_689961 15 9605 NP_001136221 15 9605 NP_079114 15 9605 XP_005252654 15 9605 XP_006715958 15 9605 XP_006715957 15 9605 XP_005266938 15 9605 XP_005266939 15 9605 XP_005266937 15 9605>NP_733751 Length = 4911 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DPYAKMVG 8 DPYAKMVG Sbjct: 1896 DPYAKMVG 1903>XP_006716142 Length = 4927 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DPYAKMVG 8 DPYAKMVG Sbjct: 1913 DPYAKMVG 1920>XP_005250088 Length = 4928 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DPYAKMVG 8 DPYAKMVG Sbjct: 1913 DPYAKMVG 1920>XP_006716141 Length = 4959 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DPYAKMVG 8 DPYAKMVG Sbjct: 1913 DPYAKMVG 1920>XP_005250085 Length = 4979 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DPYAKMVG 8 DPYAKMVG Sbjct: 1913 DPYAKMVG 1920>XP_006716140 Length = 4982 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DPYAKMVG 8 DPYAKMVG Sbjct: 1913 DPYAKMVG 1920>XP_005250084 Length = 4982 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DPYAKMVG 8 DPYAKMVG Sbjct: 1913 DPYAKMVG 1920>XP_005250083 Length = 4982 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DPYAKMVG 8 DPYAKMVG Sbjct: 1912 DPYAKMVG 1919>XP_005250082 Length = 4983 Score = 21.6 bits (44), Expect = 134 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DPYAKMVG 8 DPYAKMVG Sbjct: 1913 DPYAKMVG 1920>NP_001094092 Length = 583 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PYAKMVG 8 PY KM+G Sbjct: 26 PYCKMIG 32>NP_001275699 Length = 573 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PYAKMVG 8 PY KM+G Sbjct: 26 PYCKMIG 32>NP_001094091 Length = 573 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PYAKMVG 8 PY KM+G Sbjct: 26 PYCKMIG 32>NP_060411 Length = 609 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PYAKMVG 8 PY KM+G Sbjct: 26 PYCKMIG 32>NP_001275700 Length = 547 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PYAKMVG 8 PY KM+G Sbjct: 26 PYCKMIG 32>XP_006722029 Length = 547 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PYAKMVG 8 PY KM+G Sbjct: 26 PYCKMIG 32>XP_005257544 Length = 609 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PYAKMVG 8 PY KM+G Sbjct: 26 PYCKMIG 32>NP_665682 Length = 938 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DPYAKMV 7 DPY +MV Sbjct: 624 DPYERMV 630>NP_149353 Length = 244 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 DPYAKMV 7 DP+AK++ Sbjct: 110 DPFAKLI 116>NP_149355 Length = 204 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 DPYAKMV 7 DP+AK++ Sbjct: 70 DPFAKLI 76>NP_149354 Length = 233 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 DPYAKMV 7 DP+AK++ Sbjct: 99 DPFAKLI 105>NP_006110 Length = 215 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 DPYAKMV 7 DP+AK++ Sbjct: 81 DPFAKLI 87>NP_001193318 Length = 140 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 DPYAKMV 7 DP+AK++ Sbjct: 6 DPFAKLI 12>NP_001136028 Length = 725 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DPYAKMVG 8 D YAK++G Sbjct: 624 DSYAKLLG 631>NP_036616 Length = 724 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DPYAKMVG 8 D YAK++G Sbjct: 623 DSYAKLLG 630>NP_001136029 Length = 638 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DPYAKMVG 8 D YAK++G Sbjct: 537 DSYAKLLG 544>NP_036617 Length = 709 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DPYAKMVG 8 D YAK++G Sbjct: 608 DSYAKLLG 615>NP_001188410 Length = 903 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DPYAKMV 7 DPY +MV Sbjct: 589 DPYERMV 595>NP_115912 Length = 934 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DPYAKMV 7 DPY +MV Sbjct: 620 DPYERMV 626>NP_001188411 Length = 898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DPYAKMV 7 DPY +MV Sbjct: 584 DPYERMV 590>NP_001188409 Length = 959 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DPYAKMV 7 DPY +MV Sbjct: 645 DPYERMV 651>XP_006712295 Length = 923 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DPYAKMV 7 DPY +MV Sbjct: 609 DPYERMV 615>XP_006712294 Length = 928 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DPYAKMV 7 DPY +MV Sbjct: 614 DPYERMV 620>NP_005236 Length = 4588 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DPYAKMVG 8 DP A M+G Sbjct: 1371 DPVAHMIG 1378>NP_078813 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DPYAKMVG 8 D Y K+VG Sbjct: 202 DKYGKLVG 209>NP_775823 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PYAKMVGA 9 P+AK +GA Sbjct: 228 PFAKYLGA 235>NP_001127942 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PYAKMVGA 9 P+AK +GA Sbjct: 19 PFAKYLGA 26>XP_006720016 Length = 451 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DPYAKMVG 8 D Y K+VG Sbjct: 89 DKYGKLVG 96>XP_006714202 Length = 4588 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DPYAKMVG 8 DP A M+G Sbjct: 1371 DPVAHMIG 1378>XP_005262892 Length = 4600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DPYAKMVG 8 DP A M+G Sbjct: 1371 DPVAHMIG 1378>XP_005262891 Length = 4600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DPYAKMVG 8 DP A M+G Sbjct: 1371 DPVAHMIG 1378>NP_002022 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PYAKMVGA 9 PY+ M GA Sbjct: 433 PYSGMTGA 440>NP_689961 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DPYAKMVGA 9 D Y +VGA Sbjct: 580 DDYTNLVGA 588>NP_001136221 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DPYAKMVGA 9 D Y +VGA Sbjct: 747 DDYTNLVGA 755>NP_079114 Length = 743 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YAKMVG 8 YAKM+G Sbjct: 519 YAKMMG 524>XP_005252654 Length = 743 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YAKMVG 8 YAKM+G Sbjct: 519 YAKMMG 524>XP_006715958 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DPYAKMVGA 9 D Y +VGA Sbjct: 633 DDYTNLVGA 641>XP_006715957 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DPYAKMVGA 9 D Y +VGA Sbjct: 633 DDYTNLVGA 641>XP_005266938 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PYAKMVGA 9 PY+ M GA Sbjct: 433 PYSGMTGA 440>XP_005266939 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PYAKMVGA 9 PY+ M GA Sbjct: 433 PYSGMTGA 440>XP_005266937 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PYAKMVGA 9 PY+ M GA Sbjct: 433 PYSGMTGA 440Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.134 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 575,293 Number of extensions: 1049 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |