Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 21 229 XP_005262424 21 229 NP_037472 17 4312 NP_057613 16 5631 NP_001028198 16 5631 NP_219488 16 5631 NP_006360 16 5631 NP_036222 16 5631 XP_005259736 16 5631 XP_005259735 16 5631 XP_005259734 16 5631 XP_005259733 16 5631 XP_005259732 16 5631 XP_006719899 16 5631 XP_006719898 16 5631 XP_006719897 16 5631 XP_006719895 16 5631 XP_005266476 16 5631 XP_006710603 16 5631 XP_006710602 16 5631 XP_006710600 16 5631 XP_005270757 16 5631 XP_006710599 16 5631 XP_006710598 16 5631 XP_006710597 16 5631 XP_006710596 16 5631 XP_006710595 16 5631 XP_006710594 16 5631 XP_006710593 16 5631 XP_006710592 16 5631 XP_006710591 16 5631 XP_006710590 16 5631 XP_006710589 16 5631 XP_006710588 16 5631 XP_006710587 16 5631 XP_006710586 16 5631 XP_006710585 16 5631 XP_005270755 16 5631 XP_006710584 16 5631 XP_005270754 16 5631 XP_005270753 16 5631 XP_006710583 16 5631 XP_005270752 16 5631 XP_006710582 16 5631 XP_005270751 16 5631 XP_005270433 16 5631 NP_001135931 16 7355 NP_543147 16 7355 NP_001135932 16 7355 XP_005250006 16 7355 NP_004165 15 9605 NP_001271280 15 9605>NP_722576 Length = 3080 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NDATTARY 9 NDATTARY Sbjct: 717 NDATTARY 724>XP_005262424 Length = 2875 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NDATTARY 9 NDATTARY Sbjct: 512 NDATTARY 519>NP_037472 Length = 818 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DATTARY 9 DATT RY Sbjct: 27 DATTIRY 33>NP_057613 Length = 1188 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DNDATTARY 9 DN +TA+Y Sbjct: 70 DNQISTAKY 78>NP_001028198 Length = 620 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NDATTARY 9 ND TTA Y Sbjct: 372 NDTTTAFY 379>NP_219488 Length = 408 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NDATTARY 9 ND TTA Y Sbjct: 372 NDTTTAFY 379>NP_006360 Length = 812 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DNDATTAR 8 D DA TAR Sbjct: 775 DQDAVTAR 782>NP_036222 Length = 5430 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 3179 NDATTA 3184>XP_005259736 Length = 440 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NDATTARY 9 ND TTA Y Sbjct: 157 NDTTTAFY 164>XP_005259735 Length = 626 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NDATTARY 9 ND TTA Y Sbjct: 378 NDTTTAFY 385>XP_005259734 Length = 644 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NDATTARY 9 ND TTA Y Sbjct: 361 NDTTTAFY 368>XP_005259733 Length = 655 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NDATTARY 9 ND TTA Y Sbjct: 372 NDTTTAFY 379>XP_005259732 Length = 661 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NDATTARY 9 ND TTA Y Sbjct: 378 NDTTTAFY 385>XP_006719899 Length = 677 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DNDATTARY 9 DN +TA+Y Sbjct: 30 DNQISTAKY 38>XP_006719898 Length = 763 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DNDATTARY 9 DN +TA+Y Sbjct: 30 DNQISTAKY 38>XP_006719897 Length = 1148 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DNDATTARY 9 DN +TA+Y Sbjct: 30 DNQISTAKY 38>XP_006719895 Length = 1082 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DNDATTARY 9 DN +TA+Y Sbjct: 30 DNQISTAKY 38>XP_005266476 Length = 1148 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DNDATTARY 9 DN +TA+Y Sbjct: 30 DNQISTAKY 38>XP_006710603 Length = 5324 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 3179 NDATTA 3184>XP_006710602 Length = 7391 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5246 NDATTA 5251>XP_006710600 Length = 5384 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 3179 NDATTA 3184>XP_005270757 Length = 5460 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 3318 NDATTA 3323>XP_006710599 Length = 5656 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 3339 NDATTA 3344>XP_006710598 Length = 7553 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5236 NDATTA 5241>XP_006710597 Length = 7451 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5246 NDATTA 5251>XP_006710596 Length = 7512 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5195 NDATTA 5200>XP_006710595 Length = 7526 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5209 NDATTA 5214>XP_006710594 Length = 7528 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5211 NDATTA 5216>XP_006710593 Length = 7539 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5222 NDATTA 5227>XP_006710592 Length = 7544 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5227 NDATTA 5232>XP_006710591 Length = 7558 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5241 NDATTA 5246>XP_006710590 Length = 7563 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5246 NDATTA 5251>XP_006710589 Length = 7595 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5278 NDATTA 5283>XP_006710588 Length = 7614 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5406 NDATTA 5411>XP_006710587 Length = 7645 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5328 NDATTA 5333>XP_006710586 Length = 7645 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5406 NDATTA 5411>XP_006710585 Length = 7657 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5406 NDATTA 5411>XP_005270755 Length = 7663 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5406 NDATTA 5411>XP_006710584 Length = 7686 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5406 NDATTA 5411>XP_005270754 Length = 7694 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5406 NDATTA 5411>XP_005270753 Length = 7700 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5406 NDATTA 5411>XP_006710583 Length = 7702 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5385 NDATTA 5390>XP_005270752 Length = 7717 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5406 NDATTA 5411>XP_006710582 Length = 7720 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5406 NDATTA 5411>XP_005270751 Length = 7723 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NDATTA 7 NDATTA Sbjct: 5406 NDATTA 5411>XP_005270433 Length = 820 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DNDATTAR 8 D DA TAR Sbjct: 783 DQDAVTAR 790>NP_001135931 Length = 467 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DNDATTAR 8 D +ATTAR Sbjct: 265 DAEATTAR 272>NP_543147 Length = 452 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DNDATTAR 8 D +ATTAR Sbjct: 250 DAEATTAR 257>NP_001135932 Length = 429 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DNDATTAR 8 D +ATTAR Sbjct: 265 DAEATTAR 272>XP_005250006 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DNDATTAR 8 D +ATTAR Sbjct: 310 DAEATTAR 317>NP_004165 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DNDATTARY 9 + ATT RY Sbjct: 329 EQSATTVRY 337>NP_001271280 Length = 825 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DNDATTARY 9 + ATT RY Sbjct: 329 EQSATTVRY 337Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.118 0.330 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 449,182 Number of extensions: 704 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |