Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 20 509 NP_001263689 20 509 NP_001119584 20 509 NP_001119586 20 509 NP_001263625 20 509 NP_001119590 20 509 NP_001263690 20 509 NP_001119585 20 509 NP_001263624 20 509 NP_001119588 20 509 NP_001119587 20 509 NP_001119589 20 509 NP_001263627 20 509 NP_001263628 20 509 NP_001263626 20 509 NP_064506 17 3301 XP_005259653 16 5631 NP_064555 16 5631 NP_001269239 16 7355 NP_001243398 15 9605 NP_036462 15 9605 NP_001243397 15 9605 NP_055483 15 9605 NP_038464 15 9605 NP_995314 15 9605 NP_612152 15 9605 XP_005269721 15 9605 XP_005250100 15 9605 XP_006712264 15 9605 XP_006712263 15 9605 XP_005246254 15 9605 XP_005246253 15 9605 XP_005246252 15 9605 XP_006711970 15 9605 XP_006711969 15 9605 XP_005246249 15 9605 XP_006711968 15 9605 XP_006711967 15 9605>NP_000537 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MAIYKQSQ 9 MAIYKQSQ Sbjct: 160 MAIYKQSQ 167>NP_001263689 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MAIYKQSQ 9 MAIYKQSQ Sbjct: 121 MAIYKQSQ 128>NP_001119584 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MAIYKQSQ 9 MAIYKQSQ Sbjct: 160 MAIYKQSQ 167>NP_001119586 Length = 341 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MAIYKQSQ 9 MAIYKQSQ Sbjct: 160 MAIYKQSQ 167>NP_001263625 Length = 302 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MAIYKQSQ 9 MAIYKQSQ Sbjct: 121 MAIYKQSQ 128>NP_001119590 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MAIYKQSQ 9 MAIYKQSQ Sbjct: 121 MAIYKQSQ 128>NP_001263690 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MAIYKQSQ 9 MAIYKQSQ Sbjct: 121 MAIYKQSQ 128>NP_001119585 Length = 346 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MAIYKQSQ 9 MAIYKQSQ Sbjct: 160 MAIYKQSQ 167>NP_001263624 Length = 307 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MAIYKQSQ 9 MAIYKQSQ Sbjct: 121 MAIYKQSQ 128>NP_001119588 Length = 209 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MAIYKQSQ 9 MAIYKQSQ Sbjct: 28 MAIYKQSQ 35>NP_001119587 Length = 261 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MAIYKQSQ 9 MAIYKQSQ Sbjct: 28 MAIYKQSQ 35>NP_001119589 Length = 214 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MAIYKQSQ 9 MAIYKQSQ Sbjct: 28 MAIYKQSQ 35>NP_001263627 Length = 182 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MAIYKQSQ 9 MAIYKQSQ Sbjct: 1 MAIYKQSQ 8>NP_001263628 Length = 187 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MAIYKQSQ 9 MAIYKQSQ Sbjct: 1 MAIYKQSQ 8>NP_001263626 Length = 234 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MAIYKQSQ 9 MAIYKQSQ Sbjct: 1 MAIYKQSQ 8>NP_064506 Length = 1516 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DMAIYKQSQ 9 ++AIYKQ++ Sbjct: 73 ELAIYKQTE 81>XP_005259653 Length = 562 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MAIYKQSQ 9 ++IYKQ+Q Sbjct: 153 LSIYKQTQ 160>NP_064555 Length = 563 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MAIYKQSQ 9 ++IYKQ+Q Sbjct: 153 LSIYKQTQ 160>NP_001269239 Length = 534 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DMAIYKQSQ 9 DMA Y+Q + Sbjct: 6 DMAAYQQEE 14>NP_001243398 Length = 1781 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DMAIYKQSQ 9 D+ ++KQ+Q Sbjct: 400 DLDVFKQAQ 408>NP_036462 Length = 2073 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DMAIYKQSQ 9 D+ ++KQ+Q Sbjct: 692 DLDVFKQAQ 700>NP_001243397 Length = 1890 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DMAIYKQSQ 9 D+ ++KQ+Q Sbjct: 509 DLDVFKQAQ 517>NP_055483 Length = 1949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DMAIYKQ 7 +MAIYK+ Sbjct: 1580 EMAIYKK 1586>NP_038464 Length = 1128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AIYKQS 8 A+YKQS Sbjct: 1118 AVYKQS 1123>NP_995314 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AIYKQS 8 A+YKQS Sbjct: 1124 AVYKQS 1129>NP_612152 Length = 2849 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DMAIYKQSQ 9 DM+ YK+++ Sbjct: 365 DMSTYKEAE 373>XP_005269721 Length = 2073 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DMAIYKQSQ 9 D+ ++KQ+Q Sbjct: 692 DLDVFKQAQ 700>XP_005250100 Length = 308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IYKQSQ 9 +YKQSQ Sbjct: 285 LYKQSQ 290>XP_006712264 Length = 1126 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AIYKQS 8 A+YKQS Sbjct: 1116 AVYKQS 1121>XP_006712263 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 AIYKQS 8 A+YKQS Sbjct: 1122 AVYKQS 1127>XP_005246254 Length = 947 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DMAIYKQ 7 +MAIYK+ Sbjct: 578 EMAIYKK 584>XP_005246253 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DMAIYKQ 7 +MAIYK+ Sbjct: 669 EMAIYKK 675>XP_005246252 Length = 1850 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DMAIYKQ 7 +MAIYK+ Sbjct: 1481 EMAIYKK 1487>XP_006711970 Length = 1948 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DMAIYKQ 7 +MAIYK+ Sbjct: 1579 EMAIYKK 1585>XP_006711969 Length = 1949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DMAIYKQ 7 +MAIYK+ Sbjct: 1580 EMAIYKK 1586>XP_005246249 Length = 1949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DMAIYKQ 7 +MAIYK+ Sbjct: 1580 EMAIYKK 1586>XP_006711968 Length = 1949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DMAIYKQ 7 +MAIYK+ Sbjct: 1580 EMAIYKK 1586>XP_006711967 Length = 1949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DMAIYKQ 7 +MAIYK+ Sbjct: 1580 EMAIYKK 1586Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.120 0.306 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 384,460 Number of extensions: 513 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |