Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 21 175 XP_006716142 21 175 XP_005250088 21 175 XP_006716141 21 175 XP_005250085 21 175 XP_006716140 21 175 XP_005250084 21 175 XP_005250083 21 175 XP_005250082 21 175 NP_113651 17 2528 XP_005256246 17 2528 XP_005252782 17 3301 XP_006718182 17 3301 XP_006714215 17 3301 XP_006714214 17 3301 XP_005262915 17 3301 NP_055806 17 3301 NP_060115 16 5631 NP_001257819 16 5631 NP_001070993 16 5631 NP_001121646 16 5631 NP_001032903 16 5631 NP_071930 16 5631 XP_005259877 16 5631 XP_006714366 16 5631 XP_006714365 16 5631 XP_005265457 16 5631 NP_001070994 16 5631 NP_055790 16 5631 NP_003351 16 5631 NP_065988 16 7355 NP_006089 16 7355 NP_065120 16 7355 NP_003310 16 7355 NP_597676 16 7355 NP_001243779 16 7355 NP_596869 16 7355 NP_058633 16 7355 NP_659444 16 7355 NP_116256 16 7355 XP_005274609 16 7355 XP_005258690 16 7355 XP_005258689 16 7355 XP_005267986 16 7355 XP_005253235 16 7355 XP_005246888 16 7355 XP_006712788 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_000575 15 9605 NP_004919 15 9605 NP_001258369 15 9605 NP_001258371 15 9605 NP_001258370 15 9605 NP_940892 15 9605 NP_001191814 15 9605 NP_001191813 15 9605 NP_001265536 15 9605 NP_001191815 15 9605 NP_660288 15 9605 NP_001191812 15 9605 NP_002786 15 9605 NP_001265537 15 9605 NP_001265535 15 9605 NP_001157915 15 9605 NP_001186 15 9605 NP_001153416 15 9605 XP_006724116 15 9605 XP_006724115 15 9605 XP_006724114 15 9605 XP_005272515 15 9605 NP_001155177 15 9605 NP_001092006 15 9605 NP_003472 15 9605>NP_733751 Length = 4911 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DLSEGREIF 9 D+SEGREIF Sbjct: 861 DISEGREIF 869>XP_006716142 Length = 4927 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DLSEGREIF 9 D+SEGREIF Sbjct: 862 DISEGREIF 870>XP_005250088 Length = 4928 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DLSEGREIF 9 D+SEGREIF Sbjct: 862 DISEGREIF 870>XP_006716141 Length = 4959 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DLSEGREIF 9 D+SEGREIF Sbjct: 862 DISEGREIF 870>XP_005250085 Length = 4979 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DLSEGREIF 9 D+SEGREIF Sbjct: 862 DISEGREIF 870>XP_006716140 Length = 4982 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DLSEGREIF 9 D+SEGREIF Sbjct: 862 DISEGREIF 870>XP_005250084 Length = 4982 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DLSEGREIF 9 D+SEGREIF Sbjct: 862 DISEGREIF 870>XP_005250083 Length = 4982 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DLSEGREIF 9 D+SEGREIF Sbjct: 861 DISEGREIF 869>XP_005250082 Length = 4983 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DLSEGREIF 9 D+SEGREIF Sbjct: 862 DISEGREIF 870>NP_113651 Length = 330 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DLSEGREIF 9 D S GREI+ Sbjct: 125 DFSSGREIY 133>XP_005256246 Length = 330 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DLSEGREIF 9 D S GREI+ Sbjct: 125 DFSSGREIY 133>XP_005252782 Length = 533 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DLSEGREIF 9 D EGRE+F Sbjct: 270 DHKEGRELF 278>XP_006718182 Length = 541 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DLSEGREIF 9 D EGRE+F Sbjct: 270 DHKEGRELF 278>XP_006714215 Length = 3544 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DLSEGREI 8 D+SEGR++ Sbjct: 2206 DISEGRQL 2213>XP_006714214 Length = 3544 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DLSEGREI 8 D+SEGR++ Sbjct: 2206 DISEGRQL 2213>XP_005262915 Length = 3544 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DLSEGREI 8 D+SEGR++ Sbjct: 2206 DISEGRQL 2213>NP_055806 Length = 3526 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DLSEGREI 8 D+SEGR++ Sbjct: 2188 DISEGRQL 2195>NP_060115 Length = 955 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LSEGREI 8 LSEG+EI Sbjct: 555 LSEGKEI 561>NP_001257819 Length = 920 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LSEGREI 8 LSEG+EI Sbjct: 520 LSEGKEI 526>NP_001070993 Length = 650 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSEGREIF 9 LS+G EIF Sbjct: 383 LSKGEEIF 390>NP_001121646 Length = 541 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LSEGREI 8 LSEGR+I Sbjct: 56 LSEGRDI 62>NP_001032903 Length = 574 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLSEGREI 8 DLS+G E+ Sbjct: 408 DLSQGHEV 415>NP_071930 Length = 538 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSEGREIF 9 LS+G EIF Sbjct: 383 LSKGEEIF 390>XP_005259877 Length = 1394 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DLSEGR 6 DLSEGR Sbjct: 180 DLSEGR 185>XP_006714366 Length = 541 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LSEGREI 8 LSEGR+I Sbjct: 56 LSEGRDI 62>XP_006714365 Length = 541 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LSEGREI 8 LSEGR+I Sbjct: 56 LSEGRDI 62>XP_005265457 Length = 625 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSEGREIF 9 LS+G EIF Sbjct: 358 LSKGEEIF 365>NP_001070994 Length = 598 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSEGREIF 9 LS+G EIF Sbjct: 383 LSKGEEIF 390>NP_055790 Length = 1570 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DLSEGR 6 DLSEGR Sbjct: 356 DLSEGR 361>NP_003351 Length = 541 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LSEGREI 8 LSEGR+I Sbjct: 56 LSEGRDI 62>NP_065988 Length = 2048 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LSEGRE 7 LSEGRE Sbjct: 589 LSEGRE 594>NP_006089 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DLSEGREIF 9 DL+EG+ ++ Sbjct: 220 DLNEGKHLY 228>NP_065120 Length = 213 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLSEGREI 8 DLS+ RE+ Sbjct: 128 DLSQAREV 135>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DLSEGRE 7 DL+EG+E Sbjct: 13447 DLTEGKE 13453>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DLSEGRE 7 DL+EG+E Sbjct: 13572 DLTEGKE 13578>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DLSEGRE 7 DL+EG+E Sbjct: 20871 DLTEGKE 20877>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DLSEGRE 7 DL+EG+E Sbjct: 19944 DLTEGKE 19950>NP_058633 Length = 1462 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSEGREIF 9 + +GREIF Sbjct: 88 VEDGREIF 95>NP_659444 Length = 1033 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSEGREI 8 L EGREI Sbjct: 985 LKEGREI 991>NP_116256 Length = 695 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DLSEGREIF 9 DL+E +E+F Sbjct: 642 DLNEEQEVF 650>XP_005274609 Length = 1468 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSEGREIF 9 + +GREIF Sbjct: 94 VEDGREIF 101>XP_005258690 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSEGREI 8 L EGREI Sbjct: 468 LKEGREI 474>XP_005258689 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSEGREI 8 L EGREI Sbjct: 886 LKEGREI 892>XP_005267986 Length = 2022 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LSEGRE 7 LSEGRE Sbjct: 563 LSEGRE 568>XP_005253235 Length = 696 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DLSEGREIF 9 DL+E +E+F Sbjct: 643 DLNEEQEVF 651>XP_005246888 Length = 22663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DLSEGRE 7 DL+EG+E Sbjct: 9184 DLTEGKE 9190>XP_006712788 Length = 24022 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DLSEGRE 7 DL+EG+E Sbjct: 10543 DLTEGKE 10549>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DLSEGRE 7 DL+EG+E Sbjct: 20499 DLTEGKE 20505>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DLSEGRE 7 DL+EG+E Sbjct: 22005 DLTEGKE 22011>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DLSEGRE 7 DL+EG+E Sbjct: 22512 DLTEGKE 22518>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DLSEGRE 7 DL+EG+E Sbjct: 13639 DLTEGKE 13645>NP_000575 Length = 99 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSEGREI 8 LS+GRE+ Sbjct: 70 LSDGREL 76>NP_004919 Length = 256 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSEGREI 8 LSEG EI Sbjct: 135 LSEGEEI 141>NP_001258369 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSEGREI 8 LSEG EI Sbjct: 135 LSEGEEI 141>NP_001258371 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSEGREI 8 LSEG EI Sbjct: 94 LSEGEEI 100>NP_001258370 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSEGREI 8 LSEG EI Sbjct: 135 LSEGEEI 141>NP_940892 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DLSEGREI 8 DLSE RE+ Sbjct: 134 DLSELREV 141>NP_001191814 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DLSEGREI 8 DLSE RE+ Sbjct: 134 DLSELREV 141>NP_001191813 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DLSEGREI 8 DLSE RE+ Sbjct: 134 DLSELREV 141>NP_001265536 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LSEGREI 8 L EGRE+ Sbjct: 114 LEEGREV 120>NP_001191815 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DLSEGREI 8 DLSE RE+ Sbjct: 134 DLSELREV 141>NP_660288 Length = 794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSEGREI 8 L+EGRE+ Sbjct: 573 LAEGREL 579>NP_001191812 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DLSEGREI 8 DLSE RE+ Sbjct: 134 DLSELREV 141>NP_002786 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLSEGREI 8 +L EGR+I Sbjct: 75 ELKEGRQI 82>NP_001265537 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LSEGREI 8 L EGRE+ Sbjct: 86 LEEGREV 92>NP_001265535 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LSEGREI 8 L EGRE+ Sbjct: 86 LEEGREV 92>NP_001157915 Length = 1873 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DLSEGRE 7 +LSEGR+ Sbjct: 150 ELSEGRD 156>NP_001186 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LSEGREI 8 L EGRE+ Sbjct: 225 LEEGREV 231>NP_001153416 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSEGREI 8 L+EGRE+ Sbjct: 584 LAEGREL 590>XP_006724116 Length = 148 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSEGREI 8 LSEG EI Sbjct: 27 LSEGEEI 33>XP_006724115 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSEGREI 8 LSEG EI Sbjct: 160 LSEGEEI 166>XP_006724114 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSEGREI 8 LSEG EI Sbjct: 160 LSEGEEI 166>XP_005272515 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSEGREI 8 L+EGRE+ Sbjct: 584 LAEGREL 590>NP_001155177 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LSEGREI 8 L EGRE+ Sbjct: 100 LEEGREV 106>NP_001092006 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DLSEGR 6 D+SEGR Sbjct: 773 DISEGR 778>NP_003472 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DLSEGR 6 D+SEGR Sbjct: 750 DISEGR 755Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.146 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 642,622 Number of extensions: 1221 Number of successful extensions: 76 Number of sequences better than 10000.0: 76 Number of HSP's gapped: 76 Number of HSP's successfully gapped: 76 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |