Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 509 XP_006718908 20 509 XP_005271621 20 509 XP_006718907 20 509 XP_006718906 20 509 XP_005271619 20 509 XP_005271618 20 509 NP_057434 18 1935 NP_891989 18 1935 NP_065972 18 1935 NP_891991 18 1935 XP_006720224 18 1935 XP_005267794 18 1935 XP_005267793 18 1935 XP_005267792 18 1935 XP_006720223 18 1935 NP_009117 17 4312 NP_001165882 17 4312 NP_001165883 17 4312 NP_620409 17 4312 XP_005260322 17 4312 XP_005260321 17 4312 XP_005260320 17 4312 XP_006723758 17 4312 XP_006723757 17 4312 XP_006723756 17 4312 XP_006723755 17 4312 XP_006723754 17 4312 XP_006723753 17 4312 XP_005260319 17 4312 XP_006710999 17 4312 XP_006710998 17 4312 XP_005270453 17 4312 XP_005270452 17 4312 XP_005270451 17 4312 NP_006836 17 4312 NP_055730 16 5631 NP_001242982 16 5631 XP_006717494 16 5631 XP_006717493 16 5631 XP_006717492 16 5631 XP_006717491 16 5631 XP_006717490 16 5631 XP_006717489 16 5631 XP_006717488 16 5631 XP_006717487 16 5631 XP_006717486 16 5631 NP_055901 15 9605 NP_001363 15 9605 XP_006721528 15 9605 XP_005273841 15 9605 XP_005273840 15 9605 XP_005273839 15 9605 XP_006718500 15 9605 XP_005272199 15 9605 NP_612480 15 9605 NP_055644 15 9605>NP_000042 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DLRITQQK 8 DLRITQQK Sbjct: 1573 DLRITQQK 1580>XP_006718908 Length = 1708 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DLRITQQK 8 DLRITQQK Sbjct: 225 DLRITQQK 232>XP_005271621 Length = 2708 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DLRITQQK 8 DLRITQQK Sbjct: 1225 DLRITQQK 1232>XP_006718907 Length = 3050 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DLRITQQK 8 DLRITQQK Sbjct: 1567 DLRITQQK 1574>XP_006718906 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DLRITQQK 8 DLRITQQK Sbjct: 1573 DLRITQQK 1580>XP_005271619 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DLRITQQK 8 DLRITQQK Sbjct: 1573 DLRITQQK 1580>XP_005271618 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DLRITQQK 8 DLRITQQK Sbjct: 1573 DLRITQQK 1580>NP_057434 Length = 1377 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DLRITQQK 8 DLR+TQQ+ Sbjct: 1075 DLRVTQQE 1082>NP_891989 Length = 2046 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DLRITQQK 8 DLR+TQQ+ Sbjct: 1788 DLRVTQQE 1795>NP_065972 Length = 2133 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DLRITQQK 8 DLR+TQQ+ Sbjct: 1788 DLRVTQQE 1795>NP_891991 Length = 2090 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DLRITQQK 8 DLR+TQQ+ Sbjct: 1788 DLRVTQQE 1795>XP_006720224 Length = 1276 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DLRITQQK 8 DLR+TQQ+ Sbjct: 1075 DLRVTQQE 1082>XP_005267794 Length = 1379 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DLRITQQK 8 DLR+TQQ+ Sbjct: 1034 DLRVTQQE 1041>XP_005267793 Length = 1390 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DLRITQQK 8 DLR+TQQ+ Sbjct: 1045 DLRVTQQE 1052>XP_005267792 Length = 1420 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DLRITQQK 8 DLR+TQQ+ Sbjct: 1075 DLRVTQQE 1082>XP_006720223 Length = 1989 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DLRITQQK 8 DLR+TQQ+ Sbjct: 1788 DLRVTQQE 1795>NP_009117 Length = 2442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 +LR TQQ+N Sbjct: 2112 ELRETQQRN 2120>NP_001165882 Length = 522 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LRITQQKN 9 LRIT+Q+N Sbjct: 407 LRITRQQN 414>NP_001165883 Length = 524 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LRITQQKN 9 LRIT+Q+N Sbjct: 409 LRITRQQN 416>NP_620409 Length = 524 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LRITQQKN 9 LRIT+Q+N Sbjct: 409 LRITRQQN 416>XP_005260322 Length = 1810 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 +LR TQQ+N Sbjct: 1480 ELRETQQRN 1488>XP_005260321 Length = 2365 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 +LR TQQ+N Sbjct: 2035 ELRETQQRN 2043>XP_005260320 Length = 2370 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 +LR TQQ+N Sbjct: 2112 ELRETQQRN 2120>XP_006723758 Length = 2386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 +LR TQQ+N Sbjct: 2056 ELRETQQRN 2064>XP_006723757 Length = 2404 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 +LR TQQ+N Sbjct: 2112 ELRETQQRN 2120>XP_006723756 Length = 2442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 +LR TQQ+N Sbjct: 2112 ELRETQQRN 2120>XP_006723755 Length = 2442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 +LR TQQ+N Sbjct: 2112 ELRETQQRN 2120>XP_006723754 Length = 2442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 +LR TQQ+N Sbjct: 2112 ELRETQQRN 2120>XP_006723753 Length = 2442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 +LR TQQ+N Sbjct: 2112 ELRETQQRN 2120>XP_005260319 Length = 2442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 +LR TQQ+N Sbjct: 2112 ELRETQQRN 2120>XP_006710999 Length = 463 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LRITQQKN 9 LRIT+Q+N Sbjct: 348 LRITRQQN 355>XP_006710998 Length = 524 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LRITQQKN 9 LRIT+Q+N Sbjct: 409 LRITRQQN 416>XP_005270453 Length = 671 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 +LRIT Q+N Sbjct: 65 ELRITAQEN 73>XP_005270452 Length = 684 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 +LRIT Q+N Sbjct: 119 ELRITAQEN 127>XP_005270451 Length = 716 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 +LRIT Q+N Sbjct: 110 ELRITAQEN 118>NP_006836 Length = 725 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 +LRIT Q+N Sbjct: 119 ELRITAQEN 127>NP_055730 Length = 1710 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 DL+I ++KN Sbjct: 945 DLKIVKEKN 953>NP_001242982 Length = 1709 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 DL+I ++KN Sbjct: 944 DLKIVKEKN 952>XP_006717494 Length = 1571 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 DL+I ++KN Sbjct: 806 DLKIVKEKN 814>XP_006717493 Length = 1610 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 DL+I ++KN Sbjct: 845 DLKIVKEKN 853>XP_006717492 Length = 1635 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 DL+I ++KN Sbjct: 1307 DLKIVKEKN 1315>XP_006717491 Length = 1677 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 DL+I ++KN Sbjct: 912 DLKIVKEKN 920>XP_006717490 Length = 1791 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 DL+I ++KN Sbjct: 1026 DLKIVKEKN 1034>XP_006717489 Length = 1945 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 DL+I ++KN Sbjct: 1307 DLKIVKEKN 1315>XP_006717488 Length = 2031 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 DL+I ++KN Sbjct: 1307 DLKIVKEKN 1315>XP_006717487 Length = 2071 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 DL+I ++KN Sbjct: 1306 DLKIVKEKN 1314>XP_006717486 Length = 2072 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DLRITQQKN 9 DL+I ++KN Sbjct: 1307 DLKIVKEKN 1315>NP_055901 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DLRITQQKN 9 D+R TQQ N Sbjct: 699 DIRGTQQGN 707>NP_001363 Length = 4486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DLRITQ 6 DLR+TQ Sbjct: 3483 DLRVTQ 3488>XP_006721528 Length = 3869 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DLRITQ 6 DLR+TQ Sbjct: 3483 DLRVTQ 3488>XP_005273841 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LRITQQK 8 LR+TQQ+ Sbjct: 41 LRVTQQE 47>XP_005273840 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LRITQQK 8 LR+TQQ+ Sbjct: 41 LRVTQQE 47>XP_005273839 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LRITQQK 8 LR+TQQ+ Sbjct: 41 LRVTQQE 47>XP_006718500 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LRITQQK 8 LR+TQQ+ Sbjct: 41 LRVTQQE 47>XP_005272199 Length = 1032 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LRITQQKN 9 LRI QKN Sbjct: 857 LRINAQKN 864>NP_612480 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LRITQQK 8 LR+TQQ+ Sbjct: 41 LRVTQQE 47>NP_055644 Length = 1031 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LRITQQKN 9 LRI QKN Sbjct: 857 LRINAQKN 864Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.128 0.327 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 459,858 Number of extensions: 1019 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |