Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 21 229 NP_000170 21 229 NP_001268422 21 229 NP_001268423 21 229 XP_005264328 21 229 NP_000537 17 2528 NP_001263689 17 2528 NP_001119584 17 2528 NP_001119586 17 2528 NP_001263625 17 2528 NP_001119590 17 2528 NP_001263690 17 2528 NP_001119585 17 2528 NP_001263624 17 2528 NP_612357 17 3301 NP_085135 17 3301 XP_005258413 17 3301 NP_976308 17 3301 NP_006552 16 7355 NP_060033 16 7355 XP_006717432 16 7355 XP_006713272 16 7355 XP_005265295 16 7355 NP_001273598 15 9605 NP_001273599 15 9605 NP_001273601 15 9605 NP_001273600 15 9605 NP_861522 15 9605 NP_001273597 15 9605 NP_660149 15 9605 NP_001171134 15 9605 NP_001229277 15 9605 NP_060621 15 9605 NP_001129477 15 9605 NP_001171136 15 9605 NP_001129478 15 9605 NP_055160 15 9605 NP_443179 15 9605 NP_000810 15 9605 XP_006724053 15 9605 XP_006724052 15 9605 XP_005260998 15 9605 XP_006724051 15 9605 XP_005266703 15 9605 XP_005265784 15 9605 XP_005265783 15 9605 XP_005265781 15 9605 XP_005265778 15 9605 XP_005265639 15 9605 XP_006713478 15 9605 XP_006712674 15 9605 XP_006712673 15 9605 XP_006712672 15 9605 XP_005246722 15 9605 NP_001171135 15 9605>NP_001268421 Length = 1230 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DLMLVPDKI 9 DLM+VPDKI Sbjct: 667 DLMVVPDKI 675>NP_000170 Length = 1360 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DLMLVPDKI 9 DLM+VPDKI Sbjct: 797 DLMVVPDKI 805>NP_001268422 Length = 1058 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DLMLVPDKI 9 DLM+VPDKI Sbjct: 495 DLMVVPDKI 503>NP_001268423 Length = 1058 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DLMLVPDKI 9 DLM+VPDKI Sbjct: 495 DLMVVPDKI 503>XP_005264328 Length = 1261 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DLMLVPDKI 9 DLM+VPDKI Sbjct: 698 DLMVVPDKI 706>NP_000537 Length = 393 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DLML PD I Sbjct: 42 DLMLSPDDI 50>NP_001263689 Length = 354 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DLML PD I Sbjct: 3 DLMLSPDDI 11>NP_001119584 Length = 393 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DLML PD I Sbjct: 42 DLMLSPDDI 50>NP_001119586 Length = 341 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DLML PD I Sbjct: 42 DLMLSPDDI 50>NP_001263625 Length = 302 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DLML PD I Sbjct: 3 DLMLSPDDI 11>NP_001119590 Length = 354 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DLML PD I Sbjct: 3 DLMLSPDDI 11>NP_001263690 Length = 354 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DLML PD I Sbjct: 3 DLMLSPDDI 11>NP_001119585 Length = 346 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DLML PD I Sbjct: 42 DLMLSPDDI 50>NP_001263624 Length = 307 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DLML PD I Sbjct: 3 DLMLSPDDI 11>NP_612357 Length = 352 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DLMLVPDKI 9 +LML+P+K+ Sbjct: 153 ELMLLPEKL 161>NP_085135 Length = 2248 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DLMLVPDKI 9 +L LVPDK+ Sbjct: 1561 ELPLVPDKL 1569>XP_005258413 Length = 2249 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DLMLVPDKI 9 +L LVPDK+ Sbjct: 1562 ELPLVPDKL 1570>NP_976308 Length = 323 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DLMLVPD 7 DL+LVPD Sbjct: 25 DLVLVPD 31>NP_006552 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MLVPDKI 9 +LVPD+I Sbjct: 19 LLVPDRI 25>NP_060033 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+L PD + Sbjct: 186 DLLLQPDNL 194>XP_006717432 Length = 525 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MLVPDKI 9 +LVPD+I Sbjct: 19 LLVPDRI 25>XP_006713272 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+L PD + Sbjct: 42 DLLLQPDNL 50>XP_005265295 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+L PD + Sbjct: 158 DLLLQPDNL 166>NP_001273598 Length = 945 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLMLVPDK 8 DL+ VPD+ Sbjct: 419 DLLRVPDE 426>NP_001273599 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLMLVPDK 8 DL+ VPD+ Sbjct: 87 DLLRVPDE 94>NP_001273601 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLMLVPDK 8 DL+ VPD+ Sbjct: 572 DLLRVPDE 579>NP_001273600 Length = 857 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLMLVPDK 8 DL+ VPD+ Sbjct: 572 DLLRVPDE 579>NP_861522 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLMLVPDK 8 DL+ VPD+ Sbjct: 572 DLLRVPDE 579>NP_001273597 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLMLVPDK 8 DL+ VPD+ Sbjct: 472 DLLRVPDE 479>NP_660149 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLMLVPDK 8 DL+LVP + Sbjct: 18 DLVLVPQR 25>NP_001171134 Length = 2446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+ VPD + Sbjct: 1638 DLLQVPDDL 1646>NP_001229277 Length = 104 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVPDKI 9 LVPDK+ Sbjct: 44 LVPDKL 49>NP_060621 Length = 2472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+ VPD + Sbjct: 1638 DLLQVPDDL 1646>NP_001129477 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+L P +I Sbjct: 653 DLLLTPTRI 661>NP_001171136 Length = 2446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+ VPD + Sbjct: 1638 DLLQVPDDL 1646>NP_001129478 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+L P +I Sbjct: 653 DLLLTPTRI 661>NP_055160 Length = 2279 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+L PD I Sbjct: 1398 DLLLPPDII 1406>NP_443179 Length = 2170 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 MLVPDKI 9 +++PDK+ Sbjct: 1266 LIIPDKV 1272>NP_000810 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+L P +I Sbjct: 653 DLLLTPTRI 661>XP_006724053 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+L P +I Sbjct: 653 DLLLTPTRI 661>XP_006724052 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+L P +I Sbjct: 653 DLLLTPTRI 661>XP_005260998 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+L P +I Sbjct: 653 DLLLTPTRI 661>XP_006724051 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+L P +I Sbjct: 669 DLLLTPTRI 677>XP_005266703 Length = 1501 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 MLVPDKI 9 +++PDK+ Sbjct: 597 LIIPDKV 603>XP_005265784 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLMLVPDK 8 DL+ VPD+ Sbjct: 195 DLLRVPDE 202>XP_005265783 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLMLVPDK 8 DL+ VPD+ Sbjct: 419 DLLRVPDE 426>XP_005265781 Length = 942 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLMLVPDK 8 DL+ VPD+ Sbjct: 572 DLLRVPDE 579>XP_005265778 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLMLVPDK 8 DL+ VPD+ Sbjct: 572 DLLRVPDE 579>XP_005265639 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLMLVPDK 8 DL+LVP + Sbjct: 46 DLVLVPQR 53>XP_006713478 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLMLVPDK 8 DL+LVP + Sbjct: 78 DLVLVPQR 85>XP_006712674 Length = 2436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+ VPD + Sbjct: 1602 DLLQVPDDL 1610>XP_006712673 Length = 2441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+ VPD + Sbjct: 1607 DLLQVPDDL 1615>XP_006712672 Length = 2443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+ VPD + Sbjct: 1609 DLLQVPDDL 1617>XP_005246722 Length = 2472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+ VPD + Sbjct: 1638 DLLQVPDDL 1646>NP_001171135 Length = 2446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLMLVPDKI 9 DL+ VPD + Sbjct: 1638 DLLQVPDDL 1646Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.153 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 636,585 Number of extensions: 663 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |