Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 19 869 XP_005266703 19 869 NP_004035 17 4312 XP_005261543 17 4312 XP_005261542 17 4312 XP_005265088 17 4312 XP_006712608 17 4312 NP_777592 17 4312 NP_056281 17 4312 NP_001244025 16 5631 NP_006183 16 5631 NP_115609 16 7355 NP_002510 16 7355 XP_005268184 16 7355 XP_005268183 16 7355 XP_006716233 16 7355 NP_443085 16 7355 NP_060119 15 9605 NP_951058 15 9605 NP_000892 15 9605 NP_001159576 15 9605 NP_036446 15 9605 NP_006651 15 9605 NP_113584 15 9605 NP_620158 15 9605 NP_001165108 15 9605 NP_076919 15 9605 XP_005262029 15 9605 XP_005262028 15 9605 XP_005262026 15 9605 XP_006724637 15 9605 XP_005262025 15 9605 XP_005262024 15 9605 XP_005262023 15 9605 XP_005262022 15 9605 XP_005251984 15 9605 XP_006714285 15 9605 XP_005263071 15 9605 XP_006712360 15 9605 XP_006712359 15 9605 XP_005246376 15 9605 NP_065954 15 9605>NP_443179 Length = 2170 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DLKYEQSNS 9 DLKYEQS S Sbjct: 736 DLKYEQSIS 744>XP_005266703 Length = 1501 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DLKYEQSNS 9 DLKYEQS S Sbjct: 67 DLKYEQSIS 75>NP_004035 Length = 592 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LKYEQSNS 9 +KY QSNS Sbjct: 425 VKYTQSNS 432>XP_005261543 Length = 231 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DLKYEQSN 8 DLKYE S+ Sbjct: 199 DLKYETSS 206>XP_005261542 Length = 264 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DLKYEQSN 8 DLKYE S+ Sbjct: 232 DLKYETSS 239>XP_005265088 Length = 1694 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DLKYEQS 7 D+KYEQ+ Sbjct: 177 DIKYEQA 183>XP_006712608 Length = 533 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LKYEQSNS 9 +KY QSNS Sbjct: 366 VKYTQSNS 373>NP_777592 Length = 507 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DLKYEQSN 8 DLKYE S+ Sbjct: 475 DLKYETSS 482>NP_056281 Length = 1636 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DLKYEQS 7 D+KYEQ+ Sbjct: 109 DIKYEQA 115>NP_001244025 Length = 457 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DLKYEQSNS 9 D+KY QS S Sbjct: 348 DIKYTQSAS 356>NP_006183 Length = 534 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DLKYEQSNS 9 D+KY QS S Sbjct: 348 DIKYTQSAS 356>NP_115609 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KYEQSN 8 KYE+SN Sbjct: 501 KYEESN 506>NP_002510 Length = 1427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DLKYEQSNS 9 DLK EQ+ S Sbjct: 1229 DLKQEQTKS 1237>XP_005268184 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KYEQSN 8 KYE+SN Sbjct: 402 KYEESN 407>XP_005268183 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KYEQSN 8 KYE+SN Sbjct: 443 KYEESN 448>XP_006716233 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DLKYEQSN 8 DL+YE N Sbjct: 362 DLRYEAQN 369>NP_443085 Length = 626 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DLKYEQSN 8 DL+YE N Sbjct: 362 DLRYEAQN 369>NP_060119 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 DLKYEQSN 8 +LKY++ N Sbjct: 661 ELKYDEKN 668>NP_951058 Length = 853 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 DLKYEQSN 8 +LKY++ N Sbjct: 661 ELKYDEKN 668>NP_000892 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 DLKYEQSN 8 D YEQ N Sbjct: 116 DYSYEQQN 123>NP_001159576 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 DLKYEQSN 8 D YEQ N Sbjct: 116 DYSYEQQN 123>NP_036446 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DLKYEQSNS 9 D YE SNS Sbjct: 204 DAPYEWSNS 212>NP_006651 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DLKYEQSN 8 D+K E+SN Sbjct: 281 DIKLEKSN 288>NP_113584 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KYEQSNS 9 KY QSNS Sbjct: 1608 KYLQSNS 1614>NP_620158 Length = 591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLKYEQSNS 9 DLKY Q ++ Sbjct: 136 DLKYRQHHT 144>NP_001165108 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLKYEQSNS 9 DLKY Q ++ Sbjct: 50 DLKYRQHHT 58>NP_076919 Length = 233 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 YEQSNS 9 Y+QSNS Sbjct: 58 YQQSNS 63>XP_005262029 Length = 4240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KYEQSNS 9 KY QSNS Sbjct: 1608 KYLQSNS 1614>XP_005262028 Length = 4341 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KYEQSNS 9 KY QSNS Sbjct: 1608 KYLQSNS 1614>XP_005262026 Length = 4359 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KYEQSNS 9 KY QSNS Sbjct: 1608 KYLQSNS 1614>XP_006724637 Length = 4365 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KYEQSNS 9 KY QSNS Sbjct: 1599 KYLQSNS 1605>XP_005262025 Length = 4373 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KYEQSNS 9 KY QSNS Sbjct: 1608 KYLQSNS 1614>XP_005262024 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KYEQSNS 9 KY QSNS Sbjct: 1608 KYLQSNS 1614>XP_005262023 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KYEQSNS 9 KY QSNS Sbjct: 1608 KYLQSNS 1614>XP_005262022 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KYEQSNS 9 KY QSNS Sbjct: 1608 KYLQSNS 1614>XP_005251984 Length = 291 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DLKYEQSNS 9 DLKY Q S Sbjct: 260 DLKYTQLKS 268>XP_006714285 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 DLKYEQSN 8 D YEQ N Sbjct: 116 DYSYEQQN 123>XP_005263071 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 DLKYEQSN 8 D YEQ N Sbjct: 116 DYSYEQQN 123>XP_006712360 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLKYEQSNS 9 DLKY Q ++ Sbjct: 50 DLKYRQHHT 58>XP_006712359 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLKYEQSNS 9 DLKY Q ++ Sbjct: 122 DLKYRQHHT 130>XP_005246376 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DLKYEQSNS 9 DLKY Q ++ Sbjct: 157 DLKYRQHHT 165>NP_065954 Length = 922 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LKYEQSN 8 LKY QSN Sbjct: 200 LKYIQSN 206Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.290 0.112 0.274 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 556,899 Number of extensions: 832 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |