Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001277144                                                           21     229
NP_001277143                                                           21     229
NP_001077383                                                           21     229
NP_001320                                                              21     229
NP_073713                                                              21     229
XP_005269629                                                           21     229
XP_005269628                                                           21     229
XP_005269627                                                           21     229
XP_005269626                                                           21     229
XP_006717706                                                           21     229
XP_005269625                                                           21     229
XP_005269624                                                           21     229
XP_006717705                                                           21     229
XP_005269622                                                           21     229
XP_005269621                                                           21     229
XP_006717704                                                           21     229
XP_005269619                                                           21     229
XP_005269618                                                           21     229
NP_001319                                                              20     509
NP_001012632                                                           20     509
XP_005272320                                                           20     509
XP_005272319                                                           20     509
XP_005272318                                                           20     509
NP_060838                                                              17    3301
NP_001276018                                                           17    3301
NP_079048                                                              17    3301
NP_001276019                                                           17    3301
NP_001276017                                                           17    3301
NP_001276020                                                           17    3301
NP_001009905                                                           17    3301
XP_006725352                                                           17    3301
XP_006722336                                                           17    3301
XP_006722335                                                           17    3301
XP_005271279                                                           17    3301
XP_005271277                                                           17    3301
XP_005271276                                                           17    3301
XP_005271275                                                           17    3301
XP_005271273                                                           17    3301
NP_444252                                                              17    4312
NP_001003841                                                           17    4312
NP_001025125                                                           17    4312
NP_002619                                                              17    4312
NP_005294                                                              17    4312
NP_001153698                                                           16    5631
NP_001153730                                                           16    5631
NP_001182311                                                           16    5631
NP_001182310                                                           16    5631
NP_005292                                                              16    5631
NP_149421                                                              16    5631
NP_001153731                                                           16    5631
NP_057167                                                              16    5631
NP_001364                                                              16    5631
NP_004710                                                              16    5631
XP_006719755                                                           16    5631
XP_005269287                                                           16    5631
XP_006715393                                                           16    5631
XP_005248707                                                           16    5631
XP_006711798                                                           16    5631
NP_078825                                                              16    7355
NP_001076006                                                           16    7355
NP_001076007                                                           16    7355
NP_005950                                                              16    7355
NP_066933                                                              16    7355
NP_001002796                                                           16    7355
NP_078993                                                              16    7355
NP_001041675                                                           16    7355
NP_055942                                                              16    7355
NP_064502                                                              16    7355
NP_001265132                                                           16    7355
NP_001265131                                                           16    7355
XP_005253992                                                           16    7355
XP_005253991                                                           16    7355
XP_005251116                                                           16    7355
XP_006716714                                                           16    7355
XP_006714757                                                           16    7355
XP_006714756                                                           16    7355
XP_005272148                                                           16    7355
XP_005272147                                                           16    7355
XP_006714755                                                           16    7355
XP_005272146                                                           16    7355
XP_005272145                                                           16    7355
XP_005272144                                                           16    7355
XP_005272143                                                           16    7355
XP_005272142                                                           16    7355
XP_005272141                                                           16    7355
XP_005272140                                                           16    7355
XP_005272139                                                           16    7355
NP_001263629                                                           15    9605
NP_612202                                                              15    9605
NP_001471                                                              15    9605
>NP_001277144
          Length = 445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          DLA VAFCD
Sbjct: 53 DLATVAFCD 61
>NP_001277143
          Length = 445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          DLA VAFCD
Sbjct: 53 DLATVAFCD 61
>NP_001077383
          Length = 445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          DLA VAFCD
Sbjct: 53 DLATVAFCD 61
>NP_001320
          Length = 445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          DLA VAFCD
Sbjct: 53 DLATVAFCD 61
>NP_073713
          Length = 985

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DLAIVAFCD 9
           DLA VAFCD
Sbjct: 593 DLATVAFCD 601
>XP_005269629
          Length = 445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          DLA VAFCD
Sbjct: 53 DLATVAFCD 61
>XP_005269628
          Length = 445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          DLA VAFCD
Sbjct: 53 DLATVAFCD 61
>XP_005269627
          Length = 445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          DLA VAFCD
Sbjct: 53 DLATVAFCD 61
>XP_005269626
          Length = 445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          DLA VAFCD
Sbjct: 53 DLATVAFCD 61
>XP_006717706
          Length = 445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          DLA VAFCD
Sbjct: 53 DLATVAFCD 61
>XP_005269625
          Length = 445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          DLA VAFCD
Sbjct: 53 DLATVAFCD 61
>XP_005269624
          Length = 445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          DLA VAFCD
Sbjct: 53 DLATVAFCD 61
>XP_006717705
          Length = 445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          DLA VAFCD
Sbjct: 53 DLATVAFCD 61
>XP_005269622
          Length = 445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          DLA VAFCD
Sbjct: 53 DLATVAFCD 61
>XP_005269621
          Length = 445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          DLA VAFCD
Sbjct: 53 DLATVAFCD 61
>XP_006717704
          Length = 445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          DLA VAFCD
Sbjct: 53 DLATVAFCD 61
>XP_005269619
          Length = 445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          DLA VAFCD
Sbjct: 53 DLATVAFCD 61
>XP_005269618
          Length = 445

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          DLA VAFCD
Sbjct: 53 DLATVAFCD 61
>NP_001319
          Length = 440

 Score = 19.6 bits (39), Expect =   509
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          D+A VAFCD
Sbjct: 47 DVATVAFCD 55
>NP_001012632
          Length = 429

 Score = 19.6 bits (39), Expect =   509
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          D+A VAFCD
Sbjct: 36 DVATVAFCD 44
>XP_005272320
          Length = 430

 Score = 19.6 bits (39), Expect =   509
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          D+A VAFCD
Sbjct: 36 DVATVAFCD 44
>XP_005272319
          Length = 430

 Score = 19.6 bits (39), Expect =   509
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          D+A VAFCD
Sbjct: 36 DVATVAFCD 44
>XP_005272318
          Length = 441

 Score = 19.6 bits (39), Expect =   509
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1  DLAIVAFCD 9
          D+A VAFCD
Sbjct: 47 DVATVAFCD 55
>NP_060838
          Length = 540

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2  LAIVAFC 8
          LAI+AFC
Sbjct: 23 LAILAFC 29
>NP_001276018
          Length = 1123

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   DLAIVAFC 8
           DL+I+ FC
Sbjct: 732 DLSIIRFC 739
>NP_079048
          Length = 1142

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   DLAIVAFC 8
           DL+I+ FC
Sbjct: 751 DLSIIRFC 758
>NP_001276019
          Length = 1142

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   DLAIVAFC 8
           DL+I+ FC
Sbjct: 751 DLSIIRFC 758
>NP_001276017
          Length = 1142

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   DLAIVAFC 8
           DL+I+ FC
Sbjct: 751 DLSIIRFC 758
>NP_001276020
          Length = 782

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   DLAIVAFC 8
           DL+I+ FC
Sbjct: 391 DLSIIRFC 398
>NP_001009905
          Length = 361

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   IVAFCD 9
           +VAFCD
Sbjct: 288 VVAFCD 293
>XP_006725352
          Length = 332

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   IVAFCD 9
           +VAFCD
Sbjct: 273 VVAFCD 278
>XP_006722336
          Length = 332

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   IVAFCD 9
           +VAFCD
Sbjct: 273 VVAFCD 278
>XP_006722335
          Length = 361

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   IVAFCD 9
           +VAFCD
Sbjct: 288 VVAFCD 293
>XP_005271279
          Length = 782

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   DLAIVAFC 8
           DL+I+ FC
Sbjct: 391 DLSIIRFC 398
>XP_005271277
          Length = 951

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   DLAIVAFC 8
           DL+I+ FC
Sbjct: 560 DLSIIRFC 567
>XP_005271276
          Length = 1067

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   DLAIVAFC 8
           DL+I+ FC
Sbjct: 676 DLSIIRFC 683
>XP_005271275
          Length = 1067

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   DLAIVAFC 8
           DL+I+ FC
Sbjct: 676 DLSIIRFC 683
>XP_005271273
          Length = 1130

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   DLAIVAFC 8
           DL+I+ FC
Sbjct: 739 DLSIIRFC 746
>NP_444252
          Length = 140

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  DLAIVAFCD 9
          + AIV +CD
Sbjct: 19 EAAIVGYCD 27
>NP_001003841
          Length = 634

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   LAIVAFCD 9
           L I+AFC+
Sbjct: 494 LLIIAFCE 501
>NP_001025125
          Length = 187

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  LAIVAFC 8
          +A+VAFC
Sbjct: 7  VAVVAFC 13
>NP_002619
          Length = 140

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  DLAIVAFCD 9
          + AIV +CD
Sbjct: 19 EAAIVGYCD 27
>NP_005294
          Length = 300

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LAI AFC
Sbjct: 195 LAITAFC 201
>NP_001153698
          Length = 472

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   AIVAFC 8
           A+VAFC
Sbjct: 233 AVVAFC 238
>NP_001153730
          Length = 472

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   AIVAFC 8
           A+VAFC
Sbjct: 233 AVVAFC 238
>NP_001182311
          Length = 340

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LA+V FC
Sbjct: 215 LAVVVFC 221
>NP_001182310
          Length = 340

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LA+V FC
Sbjct: 215 LAVVVFC 221
>NP_005292
          Length = 309

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LA+V FC
Sbjct: 184 LAVVVFC 190
>NP_149421
          Length = 439

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   AIVAFC 8
           A+VAFC
Sbjct: 200 AVVAFC 205
>NP_001153731
          Length = 472

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   AIVAFC 8
           A+VAFC
Sbjct: 233 AVVAFC 238
>NP_057167
          Length = 472

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   AIVAFC 8
           A+VAFC
Sbjct: 233 AVVAFC 238
>NP_001364
          Length = 4515

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    DLAIVAFC 8
            DL+IVA C
Sbjct: 2511 DLSIVAAC 2518
>NP_004710
          Length = 1463

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   DLAIVAFCD 9
           D+ I+A CD
Sbjct: 642 DVEIIATCD 650
>XP_006719755
          Length = 1418

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   DLAIVAFCD 9
           D+ I+A CD
Sbjct: 597 DVEIIATCD 605
>XP_005269287
          Length = 1527

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   DLAIVAFCD 9
           D+ I+A CD
Sbjct: 706 DVEIIATCD 714
>XP_006715393
          Length = 472

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   AIVAFC 8
           A+VAFC
Sbjct: 233 AVVAFC 238
>XP_005248707
          Length = 472

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   AIVAFC 8
           A+VAFC
Sbjct: 233 AVVAFC 238
>XP_006711798
          Length = 4586

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    DLAIVAFC 8
            DL+IVA C
Sbjct: 2517 DLSIVAAC 2524
>NP_078825
          Length = 573

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1  DLAIVAFCD 9
          D+A++  CD
Sbjct: 73 DVAVLCVCD 81
>NP_001076006
          Length = 587

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1  DLAIVAFCD 9
          D+A++  CD
Sbjct: 73 DVAVLCVCD 81
>NP_001076007
          Length = 592

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1  DLAIVAFCD 9
          D+A++  CD
Sbjct: 73 DVAVLCVCD 81
>NP_005950
          Length = 362

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 2   LAIVAFC 8
           +A+V+FC
Sbjct: 213 IAVVSFC 219
>NP_066933
          Length = 1796

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  LAIVAFC 8
          LAIV FC
Sbjct: 17 LAIVYFC 23
>NP_001002796
          Length = 778

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LAIVA C
Sbjct: 698 LAIVALC 704
>NP_078993
          Length = 999

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LAIVA C
Sbjct: 919 LAIVALC 925
>NP_001041675
          Length = 551

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LAIVAFC 8
           LAI++FC
Sbjct: 344 LAILSFC 350
>NP_055942
          Length = 501

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LAIVAFC 8
           LAI++FC
Sbjct: 294 LAILSFC 300
>NP_064502
          Length = 1176

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   DLAIVAFCD 9
           D  +VA CD
Sbjct: 520 DECVVALCD 528
>NP_001265132
          Length = 366

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LAIVAFC 8
           LAI++FC
Sbjct: 159 LAILSFC 165
>NP_001265131
          Length = 430

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   LAIVAFC 8
           LAI++FC
Sbjct: 223 LAILSFC 229
>XP_005253992
          Length = 415

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1  DLAIVAFCD 9
          D+A++  CD
Sbjct: 73 DVAVLCVCD 81
>XP_005253991
          Length = 420

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1  DLAIVAFCD 9
          D+A++  CD
Sbjct: 73 DVAVLCVCD 81
>XP_005251116
          Length = 1780

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  LAIVAFC 8
          LAIV FC
Sbjct: 17 LAIVYFC 23
>XP_006716714
          Length = 1796

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  LAIVAFC 8
          LAIV FC
Sbjct: 17 LAIVYFC 23
>XP_006714757
          Length = 561

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LAIVA C
Sbjct: 481 LAIVALC 487
>XP_006714756
          Length = 607

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LAIVA C
Sbjct: 527 LAIVALC 533
>XP_005272148
          Length = 692

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LAIVA C
Sbjct: 612 LAIVALC 618
>XP_005272147
          Length = 732

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LAIVA C
Sbjct: 652 LAIVALC 658
>XP_006714755
          Length = 734

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LAIVA C
Sbjct: 654 LAIVALC 660
>XP_005272146
          Length = 740

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LAIVA C
Sbjct: 660 LAIVALC 666
>XP_005272145
          Length = 747

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LAIVA C
Sbjct: 667 LAIVALC 673
>XP_005272144
          Length = 752

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LAIVA C
Sbjct: 673 LAIVALC 679
>XP_005272143
          Length = 753

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LAIVA C
Sbjct: 673 LAIVALC 679
>XP_005272142
          Length = 759

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LAIVA C
Sbjct: 679 LAIVALC 685
>XP_005272141
          Length = 767

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LAIVA C
Sbjct: 687 LAIVALC 693
>XP_005272140
          Length = 792

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LAIVA C
Sbjct: 713 LAIVALC 719
>XP_005272139
          Length = 793

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   LAIVAFC 8
           LAIVA C
Sbjct: 713 LAIVALC 719
>NP_001263629
          Length = 891

 Score = 15.4 bits (28), Expect =  9605
 Identities = 3/8 (37%), Positives = 8/8 (100%)

Query: 1   DLAIVAFC 8
           D+A++++C
Sbjct: 655 DVAVLSYC 662
>NP_612202
          Length = 892

 Score = 15.4 bits (28), Expect =  9605
 Identities = 3/8 (37%), Positives = 8/8 (100%)

Query: 1   DLAIVAFC 8
           D+A++++C
Sbjct: 655 DVAVLSYC 662
>NP_001471
          Length = 349

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1  DLAIVAFC 8
          DLA + FC
Sbjct: 81 DLAYLLFC 88
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.342    0.151    0.502 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 413,495
Number of extensions: 632
Number of successful extensions: 90
Number of sequences better than 10000.0: 90
Number of HSP's gapped: 90
Number of HSP's successfully gapped: 90
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.5 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package