Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_443179                                                              20     299
XP_005266703                                                           20     299
NP_037361                                                              17    3301
NP_863651                                                              17    3301
NP_001151                                                              17    3301
NP_863658                                                              17    3301
NP_060528                                                              17    4312
NP_001193457                                                           17    4312
NP_056326                                                              17    4312
NP_001258803                                                           17    4312
XP_006723833                                                           17    4312
XP_005260442                                                           17    4312
XP_005269995                                                           17    4312
NP_037407                                                              16    5631
NP_001274143                                                           16    5631
NP_001274145                                                           16    5631
NP_001625                                                              16    5631
NP_001243112                                                           16    5631
NP_001243111                                                           16    5631
XP_006721247                                                           16    5631
XP_006721246                                                           16    5631
XP_006721245                                                           16    5631
XP_006721244                                                           16    5631
NP_116196                                                              16    7355
NP_835363                                                              16    7355
NP_001245381                                                           16    7355
NP_001245382                                                           16    7355
NP_001191109                                                           16    7355
NP_005101                                                              16    7355
XP_006717580                                                           16    7355
XP_006717579                                                           16    7355
XP_006715005                                                           16    7355
XP_005248564                                                           16    7355
NP_116236                                                              16    7355
NP_005900                                                              16    7355
NP_112166                                                              16    7355
NP_001004728                                                           16    7355
NP_001018048                                                           15    9605
NP_056001                                                              15    9605
NP_001018047                                                           15    9605
NP_150648                                                              15    9605
NP_001018098                                                           15    9605
NP_060154                                                              15    9605
NP_060550                                                              15    9605
NP_065872                                                              15    9605
NP_001274144                                                           15    9605
NP_001245213                                                           15    9605
XP_005246783                                                           15    9605
NP_065994                                                              15    9605
NP_001005486                                                           15    9605
NP_001001963                                                           15    9605
NP_001004687                                                           15    9605
NP_001004717                                                           15    9605
>NP_443179
          Length = 2170

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   DKTLEVFF 8
           DKTLEVFF
Sbjct: 857 DKTLEVFF 864
>XP_005266703
          Length = 1501

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   DKTLEVFF 8
           DKTLEVFF
Sbjct: 188 DKTLEVFF 195
>NP_037361
          Length = 1237

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   DKTLEVF 7
           DKTL+VF
Sbjct: 625 DKTLQVF 631
>NP_863651
          Length = 1248

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   DKTLEVF 7
           DKTL+VF
Sbjct: 636 DKTLQVF 642
>NP_001151
          Length = 1194

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   DKTLEVF 7
           DKTL+VF
Sbjct: 625 DKTLQVF 631
>NP_863658
          Length = 1205

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   DKTLEVF 7
           DKTL+VF
Sbjct: 636 DKTLQVF 642
>NP_060528
          Length = 661

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   DKTLEVFFS 9
           D+ LE+FF+
Sbjct: 356 DQELEIFFN 364
>NP_001193457
          Length = 645

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   DKTLEVFFS 9
           D+ LE+FF+
Sbjct: 356 DQELEIFFN 364
>NP_056326
          Length = 384

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   TLEVFFS 9
           TL+VFFS
Sbjct: 327 TLQVFFS 333
>NP_001258803
          Length = 384

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   TLEVFFS 9
           TL+VFFS
Sbjct: 327 TLQVFFS 333
>XP_006723833
          Length = 384

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   TLEVFFS 9
           TL+VFFS
Sbjct: 327 TLQVFFS 333
>XP_005260442
          Length = 384

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   TLEVFFS 9
           TL+VFFS
Sbjct: 327 TLQVFFS 333
>XP_005269995
          Length = 620

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   DKTLEVFFS 9
           D+ LE+FF+
Sbjct: 356 DQELEIFFN 364
>NP_037407
          Length = 2663

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1    DKTLEVF 7
            DKT+E+F
Sbjct: 1417 DKTIELF 1423
>NP_001274143
          Length = 305

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  DKTLEVFFS 9
          +K LEV+FS
Sbjct: 11 EKLLEVWFS 19

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   DKTLEVFFS 9
           D+TLE+  S
Sbjct: 145 DQTLEILMS 153
>NP_001274145
          Length = 214

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  DKTLEVFFS 9
          +K LEV+FS
Sbjct: 11 EKLLEVWFS 19

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  DKTLEVFFS 9
          D+TLE+  S
Sbjct: 54 DQTLEILMS 62
>NP_001625
          Length = 334

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  DKTLEVFFS 9
          +K LEV+FS
Sbjct: 11 EKLLEVWFS 19

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   DKTLEVFFS 9
           D+TLE+  S
Sbjct: 174 DQTLEILMS 182
>NP_001243112
          Length = 2663

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1    DKTLEVF 7
            DKT+E+F
Sbjct: 1417 DKTIELF 1423
>NP_001243111
          Length = 2663

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1    DKTLEVF 7
            DKT+E+F
Sbjct: 1417 DKTIELF 1423
>XP_006721247
          Length = 2564

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1    DKTLEVF 7
            DKT+E+F
Sbjct: 1318 DKTIELF 1324
>XP_006721246
          Length = 2620

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1    DKTLEVF 7
            DKT+E+F
Sbjct: 1374 DKTIELF 1380
>XP_006721245
          Length = 2629

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1    DKTLEVF 7
            DKT+E+F
Sbjct: 1383 DKTIELF 1389
>XP_006721244
          Length = 2629

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1    DKTLEVF 7
            DKT+E+F
Sbjct: 1383 DKTIELF 1389
>NP_116196
          Length = 1094

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   KTLEVFFS 9
           KTLE FF+
Sbjct: 609 KTLENFFA 616
>NP_835363
          Length = 1043

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   KTLEVFFS 9
           KTLE FF+
Sbjct: 558 KTLENFFA 565
>NP_001245381
          Length = 986

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   KTLEVFFS 9
           KTLE FF+
Sbjct: 484 KTLENFFA 491
>NP_001245382
          Length = 969

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   KTLEVFFS 9
           KTLE FF+
Sbjct: 484 KTLENFFA 491
>NP_001191109
          Length = 292

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   DKTLEVFF 8
           DKT++ FF
Sbjct: 166 DKTIKSFF 173
>NP_005101
          Length = 682

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   DKTLEVFFS 9
           DK +E FF+
Sbjct: 253 DKAVEFFFA 261
>XP_006717580
          Length = 1043

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   KTLEVFFS 9
           KTLE FF+
Sbjct: 558 KTLENFFA 565
>XP_006717579
          Length = 1180

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   KTLEVFFS 9
           KTLE FF+
Sbjct: 695 KTLENFFA 702
>XP_006715005
          Length = 628

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   DKTLEVFFS 9
           DK +E FF+
Sbjct: 253 DKAVEFFFA 261
>XP_005248564
          Length = 2342

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    DKTLEV 6
            DKTLEV
Sbjct: 1189 DKTLEV 1194
>NP_116236
          Length = 380

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   DKTLEVFF 8
           DKT++ FF
Sbjct: 198 DKTIKSFF 205
>NP_005900
          Length = 2468

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    DKTLEV 6
            DKTLEV
Sbjct: 1315 DKTLEV 1320
>NP_112166
          Length = 369

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   DKTLEVFFS 9
           DK L VF++
Sbjct: 321 DKVLSVFYT 329
>NP_001004728
          Length = 315

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   DKTLEVFFS 9
           DK + VF+S
Sbjct: 274 DKVVSVFYS 282
>NP_001018048
          Length = 3069

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   DKTLEVF 7
           +KTL+VF
Sbjct: 390 EKTLDVF 396
>NP_056001
          Length = 3095

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   DKTLEVF 7
           +KTL+VF
Sbjct: 390 EKTLDVF 396
>NP_001018047
          Length = 3135

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   DKTLEVF 7
           +KTL+VF
Sbjct: 390 EKTLDVF 396
>NP_150648
          Length = 3174

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   DKTLEVF 7
           +KTL+VF
Sbjct: 390 EKTLDVF 396
>NP_001018098
          Length = 3628

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   DKTLEVF 7
           +KTL+VF
Sbjct: 433 EKTLDVF 439
>NP_060154
          Length = 3710

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   DKTLEVF 7
           +KTL+VF
Sbjct: 390 EKTLDVF 396
>NP_060550
          Length = 3585

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   DKTLEVF 7
           +KTL+VF
Sbjct: 390 EKTLDVF 396
>NP_065872
          Length = 3753

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   DKTLEVF 7
           +KTL+VF
Sbjct: 433 EKTLDVF 439
>NP_001274144
          Length = 265

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   DKTLEVFFS 9
           D+TLE+  S
Sbjct: 105 DQTLEILMS 113
>NP_001245213
          Length = 312

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   DKTLEVFFS 9
           DK L VF++
Sbjct: 270 DKVLAVFYT 278
>XP_005246783
          Length = 908

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   DKTLEVFF 8
           D+TL+ FF
Sbjct: 605 DETLQPFF 612
>NP_065994
          Length = 908

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   DKTLEVFF 8
           D+TL+ FF
Sbjct: 605 DETLQPFF 612
>NP_001005486
          Length = 348

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   DKTLEVFFS 9
           DK L VF++
Sbjct: 292 DKVLAVFYT 300
>NP_001001963
          Length = 312

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   DKTLEVFFS 9
           DK L VF++
Sbjct: 270 DKVLAVFYT 278
>NP_001004687
          Length = 312

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   DKTLEVFFS 9
           DK L VF++
Sbjct: 270 DKVLAVFYT 278
>NP_001004717
          Length = 312

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   DKTLEVFFS 9
           +KTL VF++
Sbjct: 268 NKTLAVFYT 276
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.326    0.141    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 408,789
Number of extensions: 625
Number of successful extensions: 56
Number of sequences better than 10000.0: 53
Number of HSP's gapped: 56
Number of HSP's successfully gapped: 56
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.0 bits)
S2: 28 (15.4 bits)

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